Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.5□□□□□ -1.85
VCANP13611 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
VCANP13611 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VCANP13611 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.5□□□□□ -1.85
VCANP13611 IGKV3-31-201ENST00000523109 329 ntBASIC3.5□□□□□ -1.85
VCANP13611 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.5□□□□□ -1.85
VCANP13611 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.5□□□□□ -1.85
VCANP13611 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.5□□□□□ -1.85
VCANP13611 CYCSP41-201ENST00000616920 296 ntBASIC3.5□□□□□ -1.85
VCANP13611 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.5□□□□□ -1.85
VCANP13611 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.5□□□□□ -1.85
VCANP13611 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VCANP13611 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 VDAC2P1-201ENST00000399358 958 ntBASIC3.5□□□□□ -1.85
VCANP13611 AL353705.1-201ENST00000433468 480 ntBASIC3.5□□□□□ -1.85
VCANP13611 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.5□□□□□ -1.85
VCANP13611 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.5□□□□□ -1.85
VCANP13611 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.5□□□□□ -1.85
VCANP13611 AC008837.1-201ENST00000511513 412 ntBASIC3.5□□□□□ -1.85
VCANP13611 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.5□□□□□ -1.85
VCANP13611 AC022106.2-201ENST00000620114 757 ntBASIC3.5□□□□□ -1.85
VCANP13611 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
VCANP13611 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.5□□□□□ -1.85
VCANP13611 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
VCANP13611 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VCANP13611 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
VCANP13611 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VCANP13611 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
VCANP13611 ATP5C1P1-201ENST00000441945 895 ntBASIC3.49□□□□□ -1.85
VCANP13611 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.49□□□□□ -1.85
VCANP13611 AC008549.1-201ENST00000512900 643 ntBASIC3.49□□□□□ -1.85
VCANP13611 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.49□□□□□ -1.85
VCANP13611 CYCSP39-201ENST00000565821 309 ntBASIC3.49□□□□□ -1.85
VCANP13611 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.49□□□□□ -1.85
VCANP13611 AC006363.1-201ENST00000603806 463 ntBASIC3.49□□□□□ -1.85
VCANP13611 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
VCANP13611 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.49□□□□□ -1.85
VCANP13611 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 Y_RNA.796-201ENST00000364268 102 ntBASIC3.49□□□□□ -1.85
VCANP13611 Y_RNA.799-201ENST00000364992 102 ntBASIC3.49□□□□□ -1.85
VCANP13611 PRELID3BP10-201ENST00000431957 584 ntBASIC3.49□□□□□ -1.85
VCANP13611 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
VCANP13611 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
VCANP13611 AL356274.2-201ENST00000624379 3752 ntBASIC3.49□□□□□ -1.85
VCANP13611 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.49□□□□□ -1.85
VCANP13611 HSPD1P11-201ENST00000508643 1702 ntBASIC3.49□□□□□ -1.85
VCANP13611 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.49□□□□□ -1.85
VCANP13611 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.49□□□□□ -1.85
VCANP13611 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.49□□□□□ -1.85
VCANP13611 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.49□□□□□ -1.85
VCANP13611 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.49□□□□□ -1.85
VCANP13611 VN1R90P-201ENST00000595717 726 ntBASIC3.49□□□□□ -1.85
VCANP13611 AC004832.5-201ENST00000608677 401 ntBASIC3.49□□□□□ -1.85
VCANP13611 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.49□□□□□ -1.85
VCANP13611 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
VCANP13611 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.49□□□□□ -1.85
VCANP13611 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.48□□□□□ -1.85
VCANP13611 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.48□□□□□ -1.85
VCANP13611 MTCO1P39-201ENST00000426148 480 ntBASIC3.48□□□□□ -1.85
VCANP13611 AC092447.2-201ENST00000435487 669 ntBASIC3.48□□□□□ -1.85
VCANP13611 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.48□□□□□ -1.85
VCANP13611 LINC01355-201ENST00000566551 5444 ntBASIC3.48□□□□□ -1.85
VCANP13611 TNPO1P3-201ENST00000436471 2662 ntBASIC3.48□□□□□ -1.85
VCANP13611 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 RPL35AP12-201ENST00000425362 338 ntBASIC3.48□□□□□ -1.85
VCANP13611 RPSAP41-201ENST00000439695 860 ntBASIC3.48□□□□□ -1.85
VCANP13611 AC138938.1-201ENST00000515431 782 ntBASIC3.48□□□□□ -1.85
VCANP13611 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.48□□□□□ -1.85
VCANP13611 AC046143.2-201ENST00000609789 160 ntBASIC3.48□□□□□ -1.85
VCANP13611 AL359535.1-201ENST00000612100 1087 ntBASIC3.48□□□□□ -1.85
VCANP13611 MIR7702-201ENST00000621931 59 ntBASIC3.48□□□□□ -1.85
VCANP13611 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
VCANP13611 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.48□□□□□ -1.85
VCANP13611 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 AC068647.1-201ENST00000489539 2265 ntBASIC3.48□□□□□ -1.85
VCANP13611 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
VCANP13611 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
VCANP13611 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms