Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TOP2AP11388 BTBD10P1-201ENST00000549824 1352 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 AC125336.1-201ENST00000508893 2827 ntBASIC5.98□□□□□ -1.45
TOP2AP11388 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP2AP11388 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP2AP11388 OTUD4P1-201ENST00000237841 3067 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TOP2AP11388 AC007529.1-201ENST00000418574 2178 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 AC006484.1-201ENST00000435086 1884 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 AL831737.1-201ENST00000441288 271 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP2AP11388 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.97□□□□□ -1.45
TOP2AP11388 TMED11P-201ENST00000479478 690 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 AC011825.1-201ENST00000484967 388 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 RPL23AP94-201ENST00000512518 302 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP2AP11388 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP2AP11388 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.97□□□□□ -1.45
TOP2AP11388 RNVU1-4-201ENST00000612985 164 ntBASIC5.97□□□□□ -1.45
TOP2AP11388 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
TOP2AP11388 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TOP2AP11388 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TOP2AP11388 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
TOP2AP11388 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 SNORA54-201ENST00000384281 123 ntBASIC5.96□□□□□ -1.46
TOP2AP11388 SNORA44-201ENST00000384584 132 ntBASIC5.96□□□□□ -1.46
TOP2AP11388 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC5.96□□□□□ -1.46
TOP2AP11388 AC023141.12-201ENST00000512399 199 ntBASIC5.96□□□□□ -1.46
TOP2AP11388 AC018442.3-201ENST00000523025 183 ntBASIC5.96□□□□□ -1.46
TOP2AP11388 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.96□□□□□ -1.46
TOP2AP11388 AC004024.1-201ENST00000549244 247 ntBASIC5.96□□□□□ -1.46
TOP2AP11388 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP2AP11388 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC5.96□□□□□ -1.46
TOP2AP11388 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
TOP2AP11388 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TOP2AP11388 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TOP2AP11388 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.96□□□□□ -1.46
TOP2AP11388 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP2AP11388 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP2AP11388 Z99755.1-201ENST00000414048 380 ntBASIC5.95□□□□□ -1.46
TOP2AP11388 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.95□□□□□ -1.46
TOP2AP11388 USP12PY-201ENST00000427677 1064 ntBASIC5.95□□□□□ -1.46
TOP2AP11388 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP2AP11388 RPSAP41-201ENST00000439695 860 ntBASIC5.95□□□□□ -1.46
TOP2AP11388 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.95□□□□□ -1.46
TOP2AP11388 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.95□□□□□ -1.46
TOP2AP11388 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.95□□□□□ -1.46
TOP2AP11388 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TOP2AP11388 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP2AP11388 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP2AP11388 AC068254.2-201ENST00000623938 3577 ntBASIC5.95□□□□□ -1.46
TOP2AP11388 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP2AP11388 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TOP2AP11388 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TOP2AP11388 MTND4P22-201ENST00000413116 1169 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 IFNNP1-201ENST00000429219 553 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AC037198.2-201ENST00000478845 733 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AC021678.1-201ENST00000505195 936 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP2AP11388 DUXAP6-201ENST00000553858 601 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AL121594.4-201ENST00000556211 1196 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AC105227.2-201ENST00000615075 605 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.94□□□□□ -1.46
TOP2AP11388 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.94□□□□□ -1.46
TOP2AP11388 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TOP2AP11388 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TOP2AP11388 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TOP2AP11388 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TOP2AP11388 AC074367.1-201ENST00000438685 1125 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AF228730.2-201ENST00000438784 848 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP2AP11388 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.94□□□□□ -1.46
TOP2AP11388 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.94□□□□□ -1.46
TOP2AP11388 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TOP2AP11388 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP2AP11388 OR4R3P-201ENST00000525084 838 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AL121603.1-201ENST00000553815 142 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.94□□□□□ -1.46
TOP2AP11388 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP2AP11388 AC006557.5-201ENST00000603126 811 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.94□□□□□ -1.46
TOP2AP11388 LINC02471-203ENST00000641941 4752 ntBASIC5.94□□□□□ -1.46
TOP2AP11388 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TOP2AP11388 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.93□□□□□ -1.46
TOP2AP11388 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TOP2AP11388 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
TOP2AP11388 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TOP2AP11388 AC005261.6-201ENST00000623072 1387 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.93□□□□□ -1.46
TOP2AP11388 RNU1-140P-201ENST00000365040 165 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 RNU4-47P-201ENST00000410876 114 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 HMGN1P24-201ENST00000412282 298 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 RPL23AP69-201ENST00000431134 458 ntBASIC5.93□□□□□ -1.46
TOP2AP11388 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms