Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC007687.1-201ENST00000602704 304 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC107294.3-201ENST00000609211 526 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 AC016252.1-201ENST00000609721 474 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 MIR6868-201ENST00000611215 58 ntBASIC2.84□□□□□ -1.95
CXCL1P09341 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.84□□□□□ -1.95
CXCL1P09341 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXCL1P09341 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC2.84□□□□□ -1.96
CXCL1P09341 AP002001.2-201ENST00000529025 1469 ntBASIC2.84□□□□□ -1.96
CXCL1P09341 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.83□□□□□ -1.96
CXCL1P09341 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CXCL1P09341 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC000367.1-201ENST00000452711 1766 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 MIR383-201ENST00000362257 73 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 RNA5SP383-201ENST00000362934 120 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 RN7SKP103-201ENST00000363848 320 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
CXCL1P09341 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 HMGB3P18-201ENST00000406327 590 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 SNORA11.3-201ENST00000408471 128 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 RNU6-233P-201ENST00000410845 141 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 RN7SKP33-201ENST00000410942 340 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 HMGB3P23-201ENST00000414981 585 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC093578.1-201ENST00000415219 368 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 NDUFB4P5-201ENST00000415445 361 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC007390.1-201ENST00000415722 356 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 MTCYBP7-201ENST00000419540 1134 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC2.83□□□□□ -1.96
CXCL1P09341 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 RPS27AP7-201ENST00000422792 455 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 CNOT7P1-201ENST00000429006 852 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 B3GNT2P1-201ENST00000434960 952 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC006466.1-201ENST00000438721 289 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 CBX1P1-201ENST00000440184 427 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.83□□□□□ -1.96
CXCL1P09341 HMGN1P18-201ENST00000457642 277 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 OR9M1P-201ENST00000459641 921 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC021205.1-201ENST00000468797 348 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC041039.1-201ENST00000485656 536 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC093663.1-201ENST00000497190 394 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC108941.1-201ENST00000502853 530 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC108475.1-201ENST00000507880 950 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC2.83□□□□□ -1.96
CXCL1P09341 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 AP006245.1-201ENST00000522549 120 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AP000926.4-201ENST00000527351 454 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC068831.4-201ENST00000556118 109 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 AC084373.1-201ENST00000603311 235 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC100827.5-201ENST00000615883 426 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 SNORA11.6-201ENST00000619030 128 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 XIST_intron.1-201ENST00000619444 68 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC022149.2-201ENST00000621061 203 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 AC079684.1-201ENST00000621405 437 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 SNORA50A-202ENST00000629536 136 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CXCL1P09341 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 LARP1BP1-201ENST00000506036 1359 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 SYT14P1-202ENST00000600441 1448 ntBASIC2.83□□□□□ -1.96
CXCL1P09341 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CXCL1P09341 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CXCL1P09341 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.82□□□□□ -1.96
CXCL1P09341 RNU11-4P-201ENST00000391149 133 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC2.82□□□□□ -1.96
CXCL1P09341 MRPL50P1-201ENST00000431951 384 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 SNORA71B-202ENST00000439232 272 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.82□□□□□ -1.96
CXCL1P09341 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.82□□□□□ -1.96
CXCL1P09341 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.82□□□□□ -1.96
CXCL1P09341 RN7SL177P-201ENST00000476596 299 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 RN7SL283P-201ENST00000489055 303 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 RPS4XP14-201ENST00000493072 781 ntBASIC2.82□□□□□ -1.96
CXCL1P09341 HMGB1P21-201ENST00000502313 581 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms