Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AL049838.1-201ENST00000563647 981 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC023825.1-201ENST00000566704 1030 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC034105.4-201ENST00000568304 277 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC015912.2-201ENST00000571053 181 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC022884.3-201ENST00000579571 248 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD4P09016 AC008507.2-201ENST00000588402 1176 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXD4P09016 AC007342.8-201ENST00000623278 678 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC093875.1-201ENST00000623688 504 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC126544.2-201ENST00000625174 749 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD4P09016 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD4P09016 MIR6715B-201ENST00000637172 77 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 AC013437.2-201ENST00000639587 677 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXD4P09016 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXD4P09016 MTND5P11-201ENST00000511037 1812 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD4P09016 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
HOXD4P09016 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD4P09016 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.95□□□□□ -1.78
HOXD4P09016 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXD4P09016 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
HOXD4P09016 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 AC096656.1-201ENST00000623826 1364 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 RNU6-468P-201ENST00000384003 109 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 HMGB1P10-201ENST00000395823 563 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 RPL32P23-201ENST00000397237 405 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL022722.2-201ENST00000402519 180 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 HMGB3P19-201ENST00000403971 560 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL355615.1-201ENST00000406187 641 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 XKRYP4-201ENST00000414395 483 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 TCEA1P2-201ENST00000420496 906 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXD4P09016 DPY19L1P2-201ENST00000426647 915 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 MTCO1P43-201ENST00000431831 488 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 BMS1P19-201ENST00000433925 393 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 OR4C10P-201ENST00000434991 931 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 RPS3AP54-201ENST00000435535 734 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 RPS27P5-201ENST00000444247 244 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 XKRYP5-201ENST00000449659 483 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 HMGB1P26-201ENST00000452520 628 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD4P09016 AC108022.1-201ENST00000493466 478 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC010374.1-201ENST00000503762 1237 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC069306.1-201ENST00000507006 843 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD4P09016 RNU6-1004P-201ENST00000516584 111 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 RFPL1S-203ENST00000539579 330 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 OR8R1P-201ENST00000543943 764 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AL352979.3-201ENST00000553515 247 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD4P09016 AC008759.1-201ENST00000589783 983 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC069431.2-201ENST00000604149 1099 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC090948.2-201ENST00000607363 564 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 MIR92B-201ENST00000607575 96 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD4P09016 AL353726.1-201ENST00000614041 1000 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC233309.1-201ENST00000619522 751 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC091905.2-201ENST00000623143 306 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 AC008993.2-201ENST00000631744 806 ntBASIC3.94□□□□□ -1.78
HOXD4P09016 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD4P09016 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD4P09016 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD4P09016 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD4P09016 AC139769.1-204ENST00000472297 1931 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXD4P09016 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXD4P09016 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD4P09016 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD4P09016 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD4P09016 RN7SKP280-201ENST00000364196 304 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 RNU4-31P-201ENST00000384211 141 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 RNU1-13P-201ENST00000384499 162 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 MIR23A-201ENST00000385245 73 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 RPS27AP11-201ENST00000402798 447 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 MIR1183-201ENST00000408856 89 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 RNA5SP317-201ENST00000410176 116 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 RNU4-74P-201ENST00000411280 161 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 RNA5SP311-201ENST00000411290 116 ntBASIC3.93□□□□□ -1.78
HOXD4P09016 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD4P09016 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXD4P09016 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXD4P09016 AC106883.1-201ENST00000418805 562 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms