Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFAP04085 ASNSP3-201ENST00000451989 1306 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 AC009902.3-201ENST00000606235 2172 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC010329.2-201ENST00000595195 2737 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 RNA5SP391-201ENST00000363456 119 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFAP04085 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFAP04085 RNA5SP251-201ENST00000410614 137 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 RNU2-62P-201ENST00000410868 191 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 RPL21P50-201ENST00000417698 477 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFAP04085 RPL7AP14-201ENST00000424041 802 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 USP24P1-201ENST00000433802 779 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 ERLEC1P1-201ENST00000433806 578 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 TIMM9P1-201ENST00000436122 256 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.03□□□□□ -1.44
PDGFAP04085 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFAP04085 AC243772.1-201ENST00000451620 410 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AP001992.1-205ENST00000462248 379 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 RPS10P20-201ENST00000494130 463 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 SCARNA5-201ENST00000516201 276 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 SNORD27.1-201ENST00000516319 72 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 RN7SKP256-201ENST00000517201 314 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 RN7SKP35-201ENST00000517210 151 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC100784.1-201ENST00000522790 310 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFAP04085 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFAP04085 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFAP04085 HMGN2P47-201ENST00000559378 272 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 ULK4P1-202ENST00000565174 503 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFAP04085 AP003115.1-201ENST00000569849 463 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 MIR3614-201ENST00000581261 86 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
PDGFAP04085 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.03□□□□□ -1.44
PDGFAP04085 NF1P5-201ENST00000588287 448 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 GLUD1P4-201ENST00000590914 418 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC005191.1-201ENST00000603950 358 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.03□□□□□ -1.44
PDGFAP04085 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 AC090971.5-201ENST00000621102 293 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFAP04085 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 SMG1P5-202ENST00000529428 4219 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 SMG1P2-201ENST00000566127 4221 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PDGFAP04085 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PDGFAP04085 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
PDGFAP04085 Z97989.1-201ENST00000531702 2421 ntBASIC6.03□□□□□ -1.44
PDGFAP04085 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.02□□□□□ -1.44
PDGFAP04085 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
PDGFAP04085 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.02□□□□□ -1.45
PDGFAP04085 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
PDGFAP04085 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
PDGFAP04085 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
PDGFAP04085 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 COX6B1P3-201ENST00000312310 260 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 Y_RNA.100-201ENST00000363141 102 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 Y_RNA.367-201ENST00000365544 101 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 LCN1P2-201ENST00000372030 223 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFAP04085 OR4K12P-201ENST00000406538 961 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 RNU6-193P-201ENST00000410977 107 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 RN7SKP296-201ENST00000411185 341 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 NPM1P40-201ENST00000412758 733 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 NDUFB4P5-201ENST00000415445 361 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 AL663061.1-201ENST00000416625 580 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.02□□□□□ -1.45
PDGFAP04085 MTCYBP8-201ENST00000422855 651 ntBASIC6.02□□□□□ -1.45
PDGFAP04085 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
PDGFAP04085 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms