Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 THAP12P8-201ENST00000447914 2115 ntBASIC6.27□□□□□ -1.41
CUX2O14529 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CUX2O14529 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.27□□□□□ -1.41
CUX2O14529 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUX2O14529 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.27□□□□□ -1.41
CUX2O14529 AL035407.1-201ENST00000429211 571 ntBASIC6.27□□□□□ -1.41
CUX2O14529 HLA-N-201ENST00000437516 135 ntBASIC6.27□□□□□ -1.41
CUX2O14529 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.27□□□□□ -1.41
CUX2O14529 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC6.27□□□□□ -1.41
CUX2O14529 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
CUX2O14529 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC6.27□□□□□ -1.41
CUX2O14529 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
CUX2O14529 VN1R78P-201ENST00000597393 564 ntBASIC6.27□□□□□ -1.41
CUX2O14529 AL596275.2-204ENST00000641628 552 ntBASIC6.27□□□□□ -1.41
CUX2O14529 AL596275.2-206ENST00000641957 626 ntBASIC6.27□□□□□ -1.41
CUX2O14529 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
CUX2O14529 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CUX2O14529 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.26□□□□□ -1.41
CUX2O14529 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.26□□□□□ -1.41
CUX2O14529 HMGB1P18-201ENST00000438801 619 ntBASIC6.26□□□□□ -1.41
CUX2O14529 RPSAP41-201ENST00000439695 860 ntBASIC6.26□□□□□ -1.41
CUX2O14529 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CUX2O14529 UBE2NP1-201ENST00000545592 458 ntBASIC6.26□□□□□ -1.41
CUX2O14529 AL354760.1-201ENST00000608357 643 ntBASIC6.26□□□□□ -1.41
CUX2O14529 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.26□□□□□ -1.41
CUX2O14529 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CUX2O14529 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 AC009313.2-201ENST00000417893 1941 ntBASIC6.25□□□□□ -1.41
CUX2O14529 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6.25□□□□□ -1.41
CUX2O14529 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.25□□□□□ -1.41
CUX2O14529 RPS20P22-201ENST00000473700 357 ntBASIC6.25□□□□□ -1.41
CUX2O14529 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.25□□□□□ -1.41
CUX2O14529 HNRNPDLP4-201ENST00000605144 301 ntBASIC6.25□□□□□ -1.41
CUX2O14529 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 AC026422.1-201ENST00000623961 452 ntBASIC6.25□□□□□ -1.41
CUX2O14529 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.25□□□□□ -1.41
CUX2O14529 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.24□□□□□ -1.41
CUX2O14529 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUX2O14529 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CUX2O14529 RNA5SP235-201ENST00000365411 114 ntBASIC6.24□□□□□ -1.41
CUX2O14529 AC093698.1-201ENST00000423843 571 ntBASIC6.24□□□□□ -1.41
CUX2O14529 OSTCP5-201ENST00000425293 453 ntBASIC6.24□□□□□ -1.41
CUX2O14529 NPM1P25-201ENST00000429734 854 ntBASIC6.24□□□□□ -1.41
CUX2O14529 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC6.24□□□□□ -1.41
CUX2O14529 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.24□□□□□ -1.41
CUX2O14529 RNU6-964P-201ENST00000516524 69 ntBASIC6.24□□□□□ -1.41
CUX2O14529 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.24□□□□□ -1.41
CUX2O14529 CKS1BP3-201ENST00000600888 237 ntBASIC6.24□□□□□ -1.41
CUX2O14529 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC6.24□□□□□ -1.41
CUX2O14529 AC087241.4-201ENST00000612441 480 ntBASIC6.24□□□□□ -1.41
CUX2O14529 MIR7843-201ENST00000622274 79 ntBASIC6.24□□□□□ -1.41
CUX2O14529 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.24□□□□□ -1.41
CUX2O14529 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC6.24□□□□□ -1.41
CUX2O14529 AC138627.1-204ENST00000641894 765 ntBASIC6.24□□□□□ -1.41
CUX2O14529 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUX2O14529 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUX2O14529 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CUX2O14529 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CUX2O14529 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUX2O14529 LIPT1P1-201ENST00000415870 1186 ntBASIC6.23□□□□□ -1.41
CUX2O14529 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.23□□□□□ -1.41
CUX2O14529 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC6.23□□□□□ -1.41
CUX2O14529 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.23□□□□□ -1.41
CUX2O14529 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.23□□□□□ -1.41
CUX2O14529 AC008802.1-201ENST00000519121 791 ntBASIC6.23□□□□□ -1.41
CUX2O14529 AP001207.2-201ENST00000519490 539 ntBASIC6.23□□□□□ -1.41
CUX2O14529 CYP4A43P-201ENST00000568156 121 ntBASIC6.23□□□□□ -1.41
CUX2O14529 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.23□□□□□ -1.41
CUX2O14529 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.23□□□□□ -1.41
CUX2O14529 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.23□□□□□ -1.41
CUX2O14529 AP000553.6-201ENST00000641242 118 ntBASIC6.23□□□□□ -1.41
CUX2O14529 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
CUX2O14529 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
CUX2O14529 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUX2O14529 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC6.23□□□□□ -1.41
CUX2O14529 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUX2O14529 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.23□□□□□ -1.41
CUX2O14529 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.23□□□□□ -1.41
CUX2O14529 AC090337.1-201ENST00000579651 2074 ntBASIC6.22□□□□□ -1.41
CUX2O14529 AC083843.2-201ENST00000568248 6253 ntBASIC6.22□□□□□ -1.41
CUX2O14529 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC6.22□□□□□ -1.41
CUX2O14529 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.22□□□□□ -1.41
CUX2O14529 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CUX2O14529 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CUX2O14529 AC003685.2-201ENST00000422795 395 ntBASIC6.22□□□□□ -1.41
CUX2O14529 AC084198.1-201ENST00000477747 402 ntBASIC6.22□□□□□ -1.41
CUX2O14529 RPL21P6-201ENST00000479171 504 ntBASIC6.22□□□□□ -1.41
CUX2O14529 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CUX2O14529 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.22□□□□□ -1.41
CUX2O14529 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms