Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 HIGD1AP13-201ENST00000509878 289 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 Y_RNA.680-201ENST00000516441 93 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 AC131281.1-201ENST00000522984 164 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 MIR4685-201ENST00000578185 69 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 AL445363.3-201ENST00000623080 671 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 AC000123.2-201ENST00000623124 461 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RCCD1A6NED2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RCCD1A6NED2 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RCCD1A6NED2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RCCD1A6NED2 OR2AH1P-202ENST00000641232 2744 ntBASIC7.13□□□□□ -1.27
RCCD1A6NED2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RCCD1A6NED2 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.13□□□□□ -1.27
RCCD1A6NED2 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 NXPH1-205ENST00000602349 1953 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 RNU6-1287P-201ENST00000362914 107 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 RNA5SP114-201ENST00000363780 113 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 SNORD115-7-201ENST00000365306 82 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 Y_RNA.424-201ENST00000384063 103 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 RNU6-1060P-201ENST00000384664 107 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 Y_RNA.594-201ENST00000410373 140 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 SDAD1P3-201ENST00000427380 333 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC236972.1-201ENST00000433225 199 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AL392103.1-201ENST00000447000 198 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 HMGB3P30-201ENST00000457863 606 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 RPL21P93-201ENST00000480465 489 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC083906.1-201ENST00000509298 406 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 Y_RNA.670-201ENST00000516255 105 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 RNU1-54P-201ENST00000517181 120 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 CYCSP22-201ENST00000517555 339 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC022616.4-201ENST00000522985 181 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC106785.4-201ENST00000569492 412 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 RPS27AP19-201ENST00000597285 458 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC011626.1-201ENST00000604710 562 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC012510.1-201ENST00000607946 759 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AL596245.1-201ENST00000618994 362 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC025034.2-201ENST00000623264 286 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC055839.1-201ENST00000634467 498 ntBASIC7.12□□□□□ -1.27
RCCD1A6NED2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.12□□□□□ -1.27
RCCD1A6NED2 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RCCD1A6NED2 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RCCD1A6NED2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RCCD1A6NED2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 AC020658.2-201ENST00000559030 4020 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RCCD1A6NED2 OFD1P17-201ENST00000437639 3018 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RCCD1A6NED2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RCCD1A6NED2 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RCCD1A6NED2 RNU1-55P-201ENST00000365510 158 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 RNU6-472P-201ENST00000384299 107 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 RNA5SP53-201ENST00000391299 120 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 RNA5SP115-201ENST00000411160 107 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 HMGN1P24-201ENST00000412282 298 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.11□□□□□ -1.27
RCCD1A6NED2 PRUNEP1-201ENST00000425846 705 ntBASIC7.11□□□□□ -1.27
RCCD1A6NED2 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms