Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 DHX40P1-201ENST00000588725 1412 ntBASIC6.5□□□□□ -1.37
PCDHB11Q9Y5F2 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 SMG1P5-202ENST00000529428 4219 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 SMG1P2-201ENST00000566127 4221 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 HSPA8P14-201ENST00000552265 1805 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 Y_RNA.188-201ENST00000363952 111 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 SNORA62.1-201ENST00000364287 154 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 Y_RNA.234-201ENST00000364409 97 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 RNA5SP85-201ENST00000365378 119 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 MIR1275-201ENST00000408770 80 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 RPL31P12-201ENST00000422587 358 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 MED13P1-201ENST00000428342 171 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC079807.1-201ENST00000429993 481 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AL590233.1-201ENST00000430017 456 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 FABP5P14-201ENST00000437273 393 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC097359.1-201ENST00000447946 463 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC016724.1-201ENST00000453215 421 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC099340.1-201ENST00000475247 599 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 RN7SKP24-201ENST00000515888 284 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 RNU6-976P-201ENST00000516086 111 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 RNU6-566P-201ENST00000516790 107 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC011979.2-201ENST00000527568 352 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC007068.2-201ENST00000543168 395 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AL352984.2-202ENST00000613699 155 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 AC244100.1-202ENST00000621554 382 ntBASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDHB11Q9Y5F2 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AC062029.1-202ENST00000606164 3651 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 TAB3P1-202ENST00000452645 1634 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RNA5SP321-201ENST00000362722 111 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 Y_RNA.167-201ENST00000363735 109 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RNA5SP485-201ENST00000365053 119 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RPS4XP9-201ENST00000405151 780 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RNU6-847P-201ENST00000411115 108 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RN7SKP296-201ENST00000411185 341 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RPL36P19-201ENST00000430744 301 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AF228730.2-201ENST00000438784 848 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 CEACAMP9-201ENST00000442990 513 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AL035666.1-201ENST00000446195 348 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RPL30P15-201ENST00000457129 321 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 MTATP8P1-201ENST00000467115 207 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 RN7SL283P-201ENST00000489055 303 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AC005912.1-201ENST00000495392 255 ntBASIC6.48□□□□□ -1.37
PCDHB11Q9Y5F2 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms