Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 USMG5P1-201ENST00000425964 177 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 RPL31P44-201ENST00000447680 377 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC004801.2-202ENST00000463559 283 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC090686.1-201ENST00000481577 749 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 SCARNA16.2-201ENST00000516520 172 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 RN7SKP82-201ENST00000516786 223 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 RN7SL208P-201ENST00000577964 296 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC012368.3-201ENST00000604190 219 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AL121992.2-201ENST00000606262 256 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AL138825.1-201ENST00000618587 192 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 SNX18P10-201ENST00000625014 519 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AC021753.1-201ENST00000635724 168 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 AP001157.1-201ENST00000550837 2339 ntBASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
TRIM35Q9UPQ4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 GANC-201ENST00000318010 7781 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 DDX18P3-201ENST00000404856 2007 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 HSPE1P11-201ENST00000339579 310 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SNORA62.1-201ENST00000364287 154 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 MRPS18CP6-201ENST00000423587 223 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 TXNP5-201ENST00000441043 315 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AL118520.1-201ENST00000450770 291 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC104849.1-201ENST00000462623 405 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC117394.1-201ENST00000477323 567 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC098818.1-201ENST00000478593 252 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC108860.1-201ENST00000484521 383 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AP001025.2-201ENST00000490908 477 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SNORA58-201ENST00000505219 137 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SNORA40.14-201ENST00000516543 86 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 RPL3P13-201ENST00000550415 216 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC127381.1-201ENST00000555979 939 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC138207.8-204ENST00000579588 527 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 MIR4775-201ENST00000581168 75 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC092747.3-201ENST00000603769 301 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC073046.2-201ENST00000604756 527 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 RAC1P9-201ENST00000604990 392 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 AC244100.4-201ENST00000617747 388 ntBASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TRIM35Q9UPQ4 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
TRIM35Q9UPQ4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
TRIM35Q9UPQ4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
TRIM35Q9UPQ4 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC8.52□□□□□ -1.04
TRIM35Q9UPQ4 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
TRIM35Q9UPQ4 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms