Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 RNU6-853P-201ENST00000364306 107 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 RNY4P16-201ENST00000364768 94 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 Y_RNA.367-201ENST00000365544 101 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 RNA5SP345-201ENST00000410646 108 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 Y_RNA.646-201ENST00000410980 101 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 SKA2P1-201ENST00000425592 390 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 FTLP8-201ENST00000446770 267 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC079140.5-201ENST00000507882 310 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 ATP5LP3-201ENST00000514223 304 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 IGKV2-19-201ENST00000518132 283 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 MYL12AP1-201ENST00000518490 515 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC112191.2-201ENST00000522428 333 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC109635.4-202ENST00000531666 412 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 HAUS8P1-201ENST00000549005 542 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC105224.1-201ENST00000587055 421 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AL391813.2-201ENST00000609113 322 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 OR13C1P-202ENST00000641378 2919 ntBASIC8.58□□□□□ -1.04
PHF8Q9UPP1 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
PHF8Q9UPP1 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 IMMTP1-201ENST00000435590 2219 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC009237.3-203ENST00000442128 3551 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 MIR454-201ENST00000390180 115 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL023284.3-201ENST00000407767 334 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 RN7SKP293-201ENST00000411389 296 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 PRELID3BP11-201ENST00000414230 479 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 RPL35AP31-201ENST00000418340 337 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC093155.2-201ENST00000420734 937 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 BX284632.2-201ENST00000421091 399 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL359955.2-201ENST00000445380 353 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC128716.1-201ENST00000475129 166 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC011005.3-201ENST00000491624 395 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AK3P4-201ENST00000504283 583 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AP000648.1-201ENST00000529682 397 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 GNAI2P1-201ENST00000541815 315 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 OR8R1P-201ENST00000543943 764 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 RRN3P3-201ENST00000549207 578 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 MIR4424-201ENST00000585257 86 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 OR7E18P-201ENST00000592589 702 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC104695.3-201ENST00000604052 296 ntBASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 NACA-203ENST00000454682 6629 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 GDA-209ENST00000545168 5362 ntTSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
PHF8Q9UPP1 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 WDR95P-201ENST00000425638 1542 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.56□□□□□ -1.04
PHF8Q9UPP1 RNU6-552P-201ENST00000362869 119 ntBASIC8.56□□□□□ -1.04
PHF8Q9UPP1 Y_RNA.288-201ENST00000364854 92 ntBASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms