Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AL034351.1-201ENST00000605288 668 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AL391261.4-201ENST00000616012 481 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 MIR6075-201ENST00000620782 95 ntBASIC3.47□□□□□ -1.85
CCDC88CQ9P219 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC88CQ9P219 AL450326.2-201ENST00000421913 1962 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RNU2-65P-201ENST00000410162 185 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC017079.2-201ENST00000416102 485 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 MTND2P15-201ENST00000418575 892 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 DBIP2-201ENST00000419076 262 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RPL21P11-201ENST00000461458 483 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 U6.105-201ENST00000637379 88 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC106871.1-201ENST00000568324 3102 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 MIR7-3-201ENST00000384898 110 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AL391417.1-201ENST00000404100 426 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 HSPE1P8-201ENST00000406997 288 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RN7SKP56-201ENST00000410513 331 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC007458.1-201ENST00000542812 373 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 RN7SL339P-201ENST00000580597 296 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC015908.5-201ENST00000623289 343 ntBASIC3.46□□□□□ -1.86
CCDC88CQ9P219 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
CCDC88CQ9P219 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 MAPK10-372ENST00000641954 3413 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC074029.4-201ENST00000624796 1859 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC083899.2-201ENST00000423285 1376 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 RNA5SP197-201ENST00000363357 119 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC019155.1-201ENST00000382242 574 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 MIR183-201ENST00000384958 110 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC092647.1-201ENST00000420654 287 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AL357552.1-201ENST00000445254 415 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 RPS4XP10-201ENST00000465034 731 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC005726.1-201ENST00000494679 427 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC007342.8-201ENST00000623278 678 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AP003499.2-201ENST00000624100 483 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AC093010.3-201ENST00000570269 15214 ntBASIC3.45□□□□□ -1.86
CCDC88CQ9P219 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC88CQ9P219 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 OR6K3-202ENST00000368146 996 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 SEPT7P2-202ENST00000398921 823 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 HLFP1-201ENST00000402375 499 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 U3.39-201ENST00000408569 239 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC013470.3-201ENST00000420252 1194 ntBASIC3.44□□□□□ -1.86
CCDC88CQ9P219 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC88CQ9P219 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms