Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 RNA5SP443-201ENST00000363083 132 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AL391417.1-201ENST00000404100 426 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 RHEBP3-201ENST00000411920 351 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 Z97055.1-201ENST00000419730 712 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 MOB1AP1-201ENST00000430903 535 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 RN7SL738P-201ENST00000470264 297 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AC108941.1-201ENST00000502853 530 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AL034351.1-201ENST00000605288 668 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AC103710.3-201ENST00000608157 948 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AC006946.3-201ENST00000609791 756 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 CR392039.4-201ENST00000624968 501 ntBASIC3.6□□□□□ -1.83
VAPAQ9P0L0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
VAPAQ9P0L0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 SNORD6-201ENST00000365444 73 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RNU6-317P-201ENST00000384031 107 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 MIR124-3-201ENST00000384866 87 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 Z98941.1-201ENST00000407764 100 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RPL26P29-201ENST00000415623 438 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 PTP4A1P5-201ENST00000420305 455 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 HIGD1AP12-201ENST00000427832 281 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RPS26P40-201ENST00000435209 294 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC009263.1-201ENST00000441193 1239 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RNU7-170P-201ENST00000459303 61 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RPS23P7-201ENST00000466210 444 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RPL7P47-201ENST00000497299 556 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 PCNAP1-201ENST00000505363 709 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 MTATP6P22-201ENST00000507369 598 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC009643.1-201ENST00000532030 391 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC005255.1-201ENST00000593748 216 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AL049634.3-201ENST00000604968 457 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC010680.4-201ENST00000605334 543 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AL391261.4-201ENST00000616012 481 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC099669.2-201ENST00000616549 437 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 AC073073.2-201ENST00000609827 2578 ntBASIC3.59□□□□□ -1.83
VAPAQ9P0L0 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
VAPAQ9P0L0 SYT14P1-202ENST00000600441 1448 ntBASIC3.59□□□□□ -1.84
VAPAQ9P0L0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VAPAQ9P0L0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VAPAQ9P0L0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 OR6C69P-201ENST00000394268 893 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RNU6-564P-201ENST00000410983 104 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC002075.2-201ENST00000425207 252 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 BRWD1P3-201ENST00000428816 390 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 ELOCP11-201ENST00000436690 332 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 Z99127.2-201ENST00000441426 334 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 ELOCP16-201ENST00000444494 332 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC023512.1-201ENST00000444513 499 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 NUTF2P3-201ENST00000448540 384 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 TPMTP4-201ENST00000450749 678 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 NANOGP10-201ENST00000453325 895 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC018635.1-201ENST00000468292 1030 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RPL7L1P8-201ENST00000469911 741 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RPS3AP6-201ENST00000484430 795 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RPL30P11-201ENST00000495304 339 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.58□□□□□ -1.84
VAPAQ9P0L0 OR5H4P-201ENST00000510851 923 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 AC108120.2-201ENST00000512973 294 ntBASIC3.58□□□□□ -1.84
VAPAQ9P0L0 RNU6-1004P-201ENST00000516584 111 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms