Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AL021368.2-201ENST00000606125 5352 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AP002001.2-201ENST00000529025 1469 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AL161909.1-201ENST00000397390 712 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 MTCO3P31-201ENST00000405526 789 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AP000567.1-201ENST00000406413 156 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AL139128.1-201ENST00000413921 941 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 XKRYP4-201ENST00000414395 483 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 BTF3P9-201ENST00000418784 283 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 CNOT7P1-201ENST00000429006 852 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RPS27AP12-201ENST00000429552 465 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 SKP1P1-201ENST00000438081 489 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AL772161.1-201ENST00000439130 476 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RPS17P13-201ENST00000448974 407 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 XKRYP5-201ENST00000449659 483 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RPL21P11-201ENST00000461458 483 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RPL7P48-201ENST00000461513 746 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SL826P-201ENST00000479724 288 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC093720.1-201ENST00000505681 714 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RN7SKP83-201ENST00000516512 178 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 IGKV2D-10-201ENST00000520194 281 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 HIGD1AP18-201ENST00000520730 278 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC090877.1-201ENST00000561418 344 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC099489.2-201ENST00000574976 260 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC013244.1-201ENST00000604279 193 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC090425.2-201ENST00000608818 501 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 MIR6719-201ENST00000622428 87 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC010608.2-201ENST00000624830 470 ntBASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTNNBIP1Q9NSA3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 CCT8P1-201ENST00000413611 1657 ntBASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 CR381670.1-201ENST00000624291 1693 ntBASIC3.15□□□□□ -1.9
CTNNBIP1Q9NSA3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 MIR383-201ENST00000362257 73 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 RNA5SP399-201ENST00000364003 117 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 RNVU1-6-201ENST00000364688 164 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AL133270.1-201ENST00000402635 279 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 RN7SKP278-201ENST00000410504 342 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC010740.1-201ENST00000417035 684 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 TRBV12-2-201ENST00000489763 344 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC108475.1-201ENST00000507880 950 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 RNU6-1308P-201ENST00000516817 103 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 PDCL2P2-201ENST00000533651 189 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 CENPUP2-201ENST00000555897 1186 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 MIR3186-201ENST00000577404 85 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 RN7SL753P-201ENST00000581238 290 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC011468.4-201ENST00000603942 409 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AL390816.3-201ENST00000604527 1066 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC113194.1-201ENST00000606037 500 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 MIR6868-201ENST00000611215 58 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms