Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 OR10G5P-201ENST00000532733 358 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC092121.1-201ENST00000569452 202 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 MIR4776-2-201ENST00000580204 80 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC060771.1-201ENST00000582031 164 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC011451.2-201ENST00000604303 598 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 BX664608.1-201ENST00000610519 487 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AL133173.2-201ENST00000614270 90 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 MIR6729-201ENST00000618194 65 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AP001784.1-201ENST00000624107 428 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC068880.5-201ENST00000624331 290 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC024587.1-201ENST00000505925 2157 ntBASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRAIPQ9BWF2 AC024560.2-201ENST00000507981 1497 ntBASIC6.59□□□□□ -1.36
TRAIPQ9BWF2 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRAIPQ9BWF2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TRAIPQ9BWF2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRAIPQ9BWF2 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
TRAIPQ9BWF2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 LINC01963-201ENST00000562038 3148 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 SNORD51-201ENST00000384320 80 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 RNU6-821P-201ENST00000390995 107 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC016739.1-201ENST00000405359 345 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AL354890.1-201ENST00000413730 346 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 NMD3P2-201ENST00000421815 761 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 USP9YP15-201ENST00000442391 422 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 SLC25A51P1-201ENST00000468432 871 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AP003122.4-201ENST00000530980 758 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 GSTP1P1-201ENST00000548078 319 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC079600.1-201ENST00000550326 297 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 MIR4420-201ENST00000583944 77 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC119403.2-201ENST00000590960 598 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AL590099.1-201ENST00000615276 138 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC040168.1-201ENST00000623594 991 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AC025574.1-201ENST00000554784 1653 ntBASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
TRAIPQ9BWF2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 OR4G2P-201ENST00000328113 903 ntBASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 AC013429.2-201ENST00000418798 781 ntBASIC6.57□□□□□ -1.36
TRAIPQ9BWF2 MTCYBP24-201ENST00000420387 1106 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms