Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC139713.2-210ENST00000641741 992 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.91□□□□□ -1.78
SSX3Q99909 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 NCLP2-201ENST00000416078 1462 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SSX3Q99909 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SSX3Q99909 AC008758.3-201ENST00000507003 1829 ntBASIC3.91□□□□□ -1.78
SSX3Q99909 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
SSX3Q99909 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
SSX3Q99909 AC025263.3-201ENST00000622965 1396 ntBASIC3.9□□□□□ -1.78
SSX3Q99909 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
SSX3Q99909 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SSX3Q99909 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 AC008549.2-201ENST00000333482 706 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 RNU1-83P-201ENST00000363426 164 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 RNU6-353P-201ENST00000364266 108 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 CYB5AP4-201ENST00000396692 399 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 MIR298-201ENST00000401212 88 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AL603865.2-201ENST00000401679 213 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 RNA5SP345-201ENST00000410646 108 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 RNA5SP39-201ENST00000411245 120 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 RN7SKP100-201ENST00000411258 284 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AMD1P2-201ENST00000412936 992 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 AC234064.1-201ENST00000436312 247 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 SDR42E1P3-201ENST00000438345 502 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AL138799.3-201ENST00000438968 350 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 AL590399.6-201ENST00000446396 307 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AC000111.2-201ENST00000448200 210 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 TVP23BP2-201ENST00000455082 615 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 RPS5P7-201ENST00000456664 608 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX3Q99909 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 RPS17P2-201ENST00000461663 408 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 HMGB1P38-201ENST00000490557 577 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AC092045.1-201ENST00000495716 1231 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX3Q99909 AC020593.1-201ENST00000507399 299 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 RNU6-416P-201ENST00000516265 103 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 IGKV2D-23-201ENST00000518179 286 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX3Q99909 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.9□□□□□ -1.79
SSX3Q99909 AL049839.1-201ENST00000556151 657 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 NIFKP8-201ENST00000560500 874 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 MTCO1P40-201ENST00000574371 625 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.9□□□□□ -1.79
SSX3Q99909 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.9□□□□□ -1.79
SSX3Q99909 AL121932.1-201ENST00000605542 214 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AP002802.2-201ENST00000605877 235 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 MIR7154-201ENST00000620673 73 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 BX649567.1-201ENST00000642071 1134 ntBASIC3.9□□□□□ -1.79
SSX3Q99909 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.9□□□□□ -1.79
SSX3Q99909 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SSX3Q99909 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SSX3Q99909 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SSX3Q99909 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 AL391684.1-202ENST00000641293 1636 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC010300.1-201ENST00000600671 5134 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSX3Q99909 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.89□□□□□ -1.79
SSX3Q99909 RNU6-1243P-201ENST00000364028 107 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 SNORD74.4-201ENST00000364129 80 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SSX3Q99909 RNU6-549P-201ENST00000384433 107 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC073264.1-201ENST00000411508 416 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AC096533.1-201ENST00000411645 353 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.89□□□□□ -1.79
SSX3Q99909 AC004074.1-201ENST00000421810 1063 ntBASIC3.89□□□□□ -1.79
SSX3Q99909 AL009174.1-201ENST00000426577 416 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms