Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 LINC00993-201ENST00000420453 540 ntBASIC5.08□□□□□ -1.6
SMOQ99835 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AL049610.1-201ENST00000423374 372 ntBASIC5.08□□□□□ -1.6
SMOQ99835 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 RPS17P8-201ENST00000434525 335 ntBASIC5.08□□□□□ -1.6
SMOQ99835 RPS25P9-201ENST00000435591 252 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC005154.2-201ENST00000438110 379 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 AL591363.1-201ENST00000450091 483 ntBASIC5.08□□□□□ -1.6
SMOQ99835 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 NDUFA12P1-201ENST00000455914 406 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 RPS5P7-201ENST00000456664 608 ntBASIC5.08□□□□□ -1.6
SMOQ99835 RPS4XP12-201ENST00000461747 709 ntBASIC5.08□□□□□ -1.6
SMOQ99835 RPL23AP71-201ENST00000470966 469 ntBASIC5.08□□□□□ -1.6
SMOQ99835 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 AC011352.3-201ENST00000505162 593 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 LTV1P1-201ENST00000510683 1237 ntBASIC5.08□□□□□ -1.6
SMOQ99835 RNU6-885P-201ENST00000516607 104 ntBASIC5.08□□□□□ -1.6
SMOQ99835 IGKV2-36-201ENST00000519999 223 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC060788.1-201ENST00000521318 469 ntBASIC5.08□□□□□ -1.6
SMOQ99835 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 AC018442.3-201ENST00000523025 183 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC022880.1-201ENST00000534017 973 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC093591.2-201ENST00000565254 3843 ntBASIC5.08□□□□□ -1.6
SMOQ99835 ROCK1P1-201ENST00000573767 549 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 NTAN1P1-201ENST00000603150 646 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC006363.1-201ENST00000603806 463 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC112220.3-201ENST00000605502 502 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC006270.3-201ENST00000605967 1036 ntBASIC5.08□□□□□ -1.6
SMOQ99835 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 AC104073.3-201ENST00000610942 955 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC008443.7-201ENST00000622195 246 ntBASIC5.08□□□□□ -1.6
SMOQ99835 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.08□□□□□ -1.6
SMOQ99835 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 PCMTD1P7-201ENST00000634506 357 ntBASIC5.08□□□□□ -1.6
SMOQ99835 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 TLK1P1-201ENST00000456760 2440 ntBASIC5.08□□□□□ -1.6
SMOQ99835 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 AC100778.3-201ENST00000580060 1750 ntBASIC5.08□□□□□ -1.6
SMOQ99835 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 AC119744.1-201ENST00000454746 1715 ntBASIC5.08□□□□□ -1.6
SMOQ99835 AC104623.2-202ENST00000623477 4002 ntBASIC5.08□□□□□ -1.6
SMOQ99835 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SMOQ99835 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMOQ99835 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.08□□□□□ -1.6
SMOQ99835 SAMMSON-213ENST00000641336 1521 ntBASIC5.07□□□□□ -1.6
SMOQ99835 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.07□□□□□ -1.6
SMOQ99835 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.07□□□□□ -1.6
SMOQ99835 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMOQ99835 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SMOQ99835 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMOQ99835 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMOQ99835 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.07□□□□□ -1.6
SMOQ99835 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMOQ99835 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.07□□□□□ -1.6
SMOQ99835 AL672167.1-206ENST00000356293 943 ntBASIC5.07□□□□□ -1.6
SMOQ99835 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SMOQ99835 OR5H15-201ENST00000383696 930 ntBASIC5.07□□□□□ -1.6
SMOQ99835 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMOQ99835 RPL23AP47-201ENST00000408017 460 ntBASIC5.07□□□□□ -1.6
SMOQ99835 RNU6-648P-201ENST00000410190 107 ntBASIC5.07□□□□□ -1.6
SMOQ99835 PIGPP2-201ENST00000411569 458 ntBASIC5.07□□□□□ -1.6
SMOQ99835 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.07□□□□□ -1.6
SMOQ99835 MTCO3P41-201ENST00000414801 328 ntBASIC5.07□□□□□ -1.6
SMOQ99835 AC073069.1-201ENST00000428657 441 ntBASIC5.07□□□□□ -1.6
SMOQ99835 DYNLL1P7-201ENST00000429273 258 ntBASIC5.07□□□□□ -1.6
SMOQ99835 RPS24P8-201ENST00000431490 402 ntBASIC5.07□□□□□ -1.6
SMOQ99835 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.07□□□□□ -1.6
SMOQ99835 RPL7P59-201ENST00000447700 943 ntBASIC5.07□□□□□ -1.6
SMOQ99835 BTF3P6-201ENST00000448054 499 ntBASIC5.07□□□□□ -1.6
SMOQ99835 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.07□□□□□ -1.6
SMOQ99835 DDX39BP2-208ENST00000453923 258 ntBASIC5.07□□□□□ -1.6
SMOQ99835 RPL23AP12-201ENST00000467573 473 ntBASIC5.07□□□□□ -1.6
SMOQ99835 ARL4AP1-201ENST00000503220 705 ntBASIC5.07□□□□□ -1.6
SMOQ99835 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.07□□□□□ -1.6
SMOQ99835 AC091868.1-201ENST00000508746 304 ntBASIC5.07□□□□□ -1.6
SMOQ99835 AC091965.2-201ENST00000512324 613 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms