Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CITED4Q96RK1 RNU1-59P-201ENST00000364829 162 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CITED4Q96RK1 MIR514A2-201ENST00000385131 88 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 MIR514A3-201ENST00000385132 88 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC009237.9-201ENST00000414800 347 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 RPSAP60-201ENST00000415403 880 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL391219.1-201ENST00000422570 483 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC009299.1-201ENST00000429684 717 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 PUDPP2-201ENST00000431423 643 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 RPS20P1-201ENST00000434853 354 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC002553.2-201ENST00000453217 340 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC234782.3-201ENST00000461229 433 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 MTND4P17-201ENST00000470444 350 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 RN7SL332P-201ENST00000482163 254 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 RN7SL182P-201ENST00000496499 300 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 Y_RNA.665-201ENST00000516177 98 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 RNU6-273P-201ENST00000516937 96 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AP005597.4-201ENST00000526762 229 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AP005435.4-201ENST00000529514 284 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 TRIM51DP-201ENST00000529746 596 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 CR383656.7-201ENST00000548164 174 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC092868.2-201ENST00000558749 497 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC023827.2-201ENST00000566880 1061 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 MIR4703-201ENST00000577728 79 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 SNORA70D-201ENST00000578836 135 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC087575.1-201ENST00000585087 229 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC007136.1-201ENST00000589141 199 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 EXOSC3P2-201ENST00000594464 497 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC103564.3-201ENST00000621194 220 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 AL353898.2-201ENST00000623000 255 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CITED4Q96RK1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CITED4Q96RK1 AC109446.4-201ENST00000623235 2755 ntBASIC5.76□□□□□ -1.49
CITED4Q96RK1 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CITED4Q96RK1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL355834.1-201ENST00000556602 3965 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AC093278.2-201ENST00000564956 2485 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CITED4Q96RK1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL157713.1-201ENST00000379752 1531 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CITED4Q96RK1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 RNU6-188P-201ENST00000364207 107 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 LCN1P2-201ENST00000372030 223 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 MIR498-201ENST00000385134 124 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 MIR1250-201ENST00000408098 113 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 SNX18P13-201ENST00000412442 529 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 BRK1P2-201ENST00000442875 223 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 RPL21P133-201ENST00000443666 476 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 AC016696.1-201ENST00000446949 318 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AL118520.1-201ENST00000450770 291 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 RPL36AP13-201ENST00000457490 317 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 RN7SL414P-201ENST00000469545 294 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 RN7SL861P-201ENST00000473793 285 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 RPS15AP36-201ENST00000492022 382 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.75□□□□□ -1.49
CITED4Q96RK1 AC112484.3-201ENST00000505910 329 ntBASIC5.75□□□□□ -1.49
CITED4Q96RK1 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms