Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RTP4Q96DX8 FAM3C2-201ENST00000312214 681 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 RNU1-94P-201ENST00000362627 173 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 RNA5SP447-201ENST00000363749 119 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 RNU6-236P-201ENST00000363886 106 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL049693.1-201ENST00000402760 611 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 ELOCP9-201ENST00000418624 239 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC246680.2-201ENST00000422106 389 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 CHIAP3-201ENST00000423668 1133 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 RPEP3-201ENST00000425462 676 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 HIGD1AP12-201ENST00000427832 281 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 ETF1P3-201ENST00000430422 1160 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 PRELID3BP10-201ENST00000431957 584 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL035458.1-201ENST00000433096 585 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC073143.1-201ENST00000436316 395 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 RPS27AP17-201ENST00000463344 455 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC006499.6-201ENST00000511169 607 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC108120.2-201ENST00000512973 294 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC110760.3-201ENST00000598794 467 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC008782.1-201ENST00000603386 430 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL133507.1-201ENST00000605269 557 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC024257.5-201ENST00000612739 531 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL121873.1-201ENST00000616013 524 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC009318.3-201ENST00000616916 503 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AP004607.9-201ENST00000618202 316 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL158163.2-201ENST00000619110 700 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 AC068620.4-201ENST00000636730 1182 ntBASIC4.5□□□□□ -1.69
RTP4Q96DX8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RTP4Q96DX8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RTP4Q96DX8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RTP4Q96DX8 A2MP1-204ENST00000566278 4130 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 RNU4-92P-201ENST00000363783 136 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 RNU1-130P-201ENST00000363930 160 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 RNU4-51P-201ENST00000364206 140 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 RNU6-244P-201ENST00000391028 104 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 HMGB3P31-201ENST00000413333 595 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 LINC01347-201ENST00000417964 355 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC090960.1-201ENST00000421072 306 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 UQCRBP1-201ENST00000421129 336 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AL592293.2-201ENST00000422292 996 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 AL732292.1-201ENST00000426692 226 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 USP9YP11-201ENST00000427537 717 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 FGF7P5-201ENST00000441829 291 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 AL133217.1-201ENST00000450980 425 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 DHFRP3-201ENST00000455595 559 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC103987.1-201ENST00000473394 348 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 RPS3AP22-201ENST00000488297 769 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC034244.1-201ENST00000507687 207 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 MTCO1P47-201ENST00000523889 1271 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC125611.1-201ENST00000549563 229 ntBASIC4.49□□□□□ -1.69
RTP4Q96DX8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.49□□□□□ -1.69
RTP4Q96DX8 AC069061.3-201ENST00000582254 823 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms