Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTHRC1Q96CG8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 ZNF37BP-203ENST00000452306 1352 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 PCAT14-202ENST00000627127 3935 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RNU4-44P-201ENST00000363050 141 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RNA5SP428-201ENST00000365129 132 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC006366.1-201ENST00000422002 759 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AL049610.1-201ENST00000423374 372 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 TCEA1P3-201ENST00000443005 880 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RPL23AP15-201ENST00000450202 459 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC243772.1-201ENST00000451620 410 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RN7SL610P-201ENST00000463845 291 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RN7SL826P-201ENST00000479724 288 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC109486.1-201ENST00000486833 374 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 UBA52P3-201ENST00000491303 382 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC231760.1-201ENST00000498002 260 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 KLRA1P-201ENST00000503499 986 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RPS27AP18-201ENST00000515536 459 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RN7SKP66-201ENST00000516681 231 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC239860.2-201ENST00000525886 270 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 SLC2A13P1-201ENST00000531560 322 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AP001094.1-201ENST00000579805 193 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC011840.5-201ENST00000582125 771 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC012360.2-201ENST00000609349 391 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC104073.3-201ENST00000610942 955 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC120349.2-201ENST00000625002 298 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC006927.3-201ENST00000638789 384 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 OR2L1P-202ENST00000641567 1023 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CTHRC1Q96CG8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 AC063976.2-201ENST00000425667 3556 ntBASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.65□□□□□ -1.66
CTHRC1Q96CG8 AC133552.1-201ENST00000569988 4007 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 RNU6-216P-201ENST00000363282 104 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 RNA5SP455-201ENST00000365190 119 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 AL589647.1-201ENST00000402485 466 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 Z97832.1-201ENST00000402490 328 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 Y_RNA.599-201ENST00000410489 109 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 GJA6P-201ENST00000415117 1042 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 AC092634.6-201ENST00000418558 192 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 RPL37P1-201ENST00000432310 284 ntBASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.65□□□□□ -1.67
CTHRC1Q96CG8 BTF3P6-201ENST00000448054 499 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms