Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC022467.1-201ENST00000614738 749 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MIR6886-201ENST00000619864 61 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC073429.2-201ENST00000569694 1444 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 AC011477.1-204ENST00000623416 1325 ntBASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ATG4AQ8WYN0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 KARSP3-201ENST00000571212 1504 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 U8.4-201ENST00000363626 134 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RNU6-253P-201ENST00000384730 105 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RNU6-1300P-201ENST00000391046 108 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RNU2-42P-201ENST00000410697 113 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RNU2-6P-201ENST00000411404 190 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AL450992.3-201ENST00000413192 568 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC00993-201ENST00000420453 540 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 IFNNP1-201ENST00000429219 553 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 MTCO3P21-201ENST00000430791 643 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AP000936.3-201ENST00000438127 255 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 MTND1P34-201ENST00000438556 671 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 ELOCP30-201ENST00000447108 299 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RPS26P39-201ENST00000469206 341 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RPS27P23-201ENST00000487608 251 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RN7SKP31-201ENST00000516354 278 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RN7SKP147-201ENST00000517154 244 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 IGKV2-36-201ENST00000519999 223 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 COX6B1P6-201ENST00000522347 255 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 SMG1P6-201ENST00000532337 2930 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 WISP1-OT1-201ENST00000602893 642 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AL137072.1-201ENST00000603444 466 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC020910.3-201ENST00000603701 874 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC112220.3-201ENST00000605502 502 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC068792.1-201ENST00000621354 417 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC008443.7-201ENST00000622195 246 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC073348.1-201ENST00000623002 331 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC005086.4-201ENST00000623065 213 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 ZNF833P-201ENST00000424938 1494 ntBASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ATG4AQ8WYN0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC119744.1-201ENST00000454746 1715 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 MT-TH-201ENST00000387441 69 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 SNORA26.8-201ENST00000391306 124 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 U3.30-201ENST00000391308 210 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RNU6-648P-201ENST00000410190 107 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL445213.1-201ENST00000412589 747 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC007559.1-201ENST00000428736 355 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL353706.1-201ENST00000436728 494 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL031663.1-201ENST00000437445 219 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AL591363.1-201ENST00000450091 483 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC010733.1-201ENST00000451515 401 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 DDX39BP2-208ENST00000453923 258 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 NDUFA12P1-201ENST00000455914 406 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 AC005532.2-201ENST00000467154 373 ntBASIC4.92□□□□□ -1.62
ATG4AQ8WYN0 RN7SL214P-201ENST00000487317 265 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms