Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 CCDC58P3-201ENST00000590792 430 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC103792.1-201ENST00000603591 919 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC015908.5-201ENST00000623289 343 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC109454.4-201ENST00000623411 649 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC015726.3-201ENST00000624501 418 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC055839.1-201ENST00000634467 498 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC090017.1-201ENST00000548612 1779 ntBASIC4.5□□□□□ -1.69
PCDH20Q8N6Y1 AC006042.3-201ENST00000454684 1469 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 LINC01109-201ENST00000603837 3081 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 RNU1-87P-201ENST00000363727 170 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 RNU6-317P-201ENST00000384031 107 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 NCSTNP1-201ENST00000406229 144 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 SNRPFP1-201ENST00000414761 252 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC027644.1-201ENST00000419595 298 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC073143.1-201ENST00000436316 395 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 CBX1P4-201ENST00000439415 457 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 CBX1P1-201ENST00000440184 427 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC114495.1-201ENST00000441274 436 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 FHP1-201ENST00000442741 703 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 HMGB3P6-201ENST00000444896 598 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 Z73417.1-201ENST00000447373 778 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 RPS23P7-201ENST00000466210 444 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC091959.2-201ENST00000477363 321 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC068587.2-201ENST00000478386 781 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 METTL15P1-201ENST00000481421 1045 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC108022.1-201ENST00000493466 478 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 RN7SL812P-201ENST00000493791 279 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC079587.1-201ENST00000603846 277 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC023509.5-201ENST00000617434 807 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 uc_338.13-201ENST00000618243 179 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 VN1R7P-201ENST00000619242 903 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC096656.1-201ENST00000623826 1364 ntBASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDH20Q8N6Y1 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AC008033.1-201ENST00000216407 1162 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RNU6-178P-201ENST00000384631 104 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 SNORA11C-201ENST00000408532 129 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RN7SKP167-201ENST00000411047 285 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RAB28P1-201ENST00000411517 641 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AC009302.1-201ENST00000417147 390 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 COX6CP17-201ENST00000421389 185 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RPS12P5-201ENST00000423449 371 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 HMGB1P45-201ENST00000435986 653 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 CR769776.1-201ENST00000441254 787 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AL591719.1-201ENST00000444669 744 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AL589880.1-201ENST00000448271 287 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 TPT1P12-201ENST00000448968 492 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 DDX39BP2-208ENST00000453923 258 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AC005229.2-201ENST00000456995 399 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RN7SL303P-201ENST00000469773 251 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RN7SL860P-201ENST00000473738 223 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 RPL23AP65-201ENST00000475608 468 ntBASIC4.48□□□□□ -1.69
PCDH20Q8N6Y1 AL161747.1-201ENST00000480068 358 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms