Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
ARHGEF39Q8N4T4 SAMMSON-210ENST00000641260 1308 ntBASIC5.47□□□□□ -1.53
ARHGEF39Q8N4T4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ARHGEF39Q8N4T4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
ARHGEF39Q8N4T4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.46□□□□□ -1.53
ARHGEF39Q8N4T4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 Y_RNA.46-201ENST00000362695 102 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 Y_RNA.160-201ENST00000363677 92 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 RNA5SP514-201ENST00000363717 111 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 Y_RNA.481-201ENST00000384373 102 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 RN7SKP279-201ENST00000411383 298 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 BMS1P17-202ENST00000416720 316 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AL662874.1-201ENST00000426065 230 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 MTCO2P11-201ENST00000431069 680 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 HMGB3P24-201ENST00000433260 622 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC064862.4-201ENST00000442180 334 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 HSPE1P28-201ENST00000443139 211 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 FAM103A2P-201ENST00000444122 354 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC132479.1-201ENST00000449160 144 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 RPL31P15-201ENST00000449770 338 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC243772.1-201ENST00000451620 410 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 MTND1P12-201ENST00000455231 147 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 NXT1P1-201ENST00000458481 316 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 RPL32P33-201ENST00000487023 394 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC074255.1-201ENST00000511259 501 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 RNU6-714P-201ENST00000516963 103 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AP003034.1-201ENST00000534621 422 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AL359212.1-201ENST00000556608 614 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC018552.1-201ENST00000562099 811 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 MIR4420-201ENST00000583944 77 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC073091.2-201ENST00000603205 907 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 C8orf59P2-201ENST00000603441 271 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC012150.2-201ENST00000621300 544 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AL445264.1-201ENST00000621719 171 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AC004009.2-201ENST00000623016 728 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 AL049780.3-201ENST00000624612 1583 ntBASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ARHGEF39Q8N4T4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 AC024560.2-201ENST00000507981 1497 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 AC007342.5-201ENST00000571340 2142 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 HSPA8P18-201ENST00000439846 1928 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 GTF2IP4-201ENST00000453092 2054 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 RNA5SP30-201ENST00000365552 115 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 RNU6-744P-201ENST00000365557 107 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 RNU6-1316P-201ENST00000384242 108 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 MIR130A-201ENST00000385274 89 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 SNORA17A-201ENST00000391185 133 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 RPL7P25-201ENST00000404151 721 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 RPL21P111-201ENST00000418453 477 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 ZNF90P2-204ENST00000419323 1075 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 MTCO2P5-201ENST00000422621 426 ntBASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.45□□□□□ -1.54
ARHGEF39Q8N4T4 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms