Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC008562.1-201ENST00000521763 330 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 OR5D2P-201ENST00000524390 911 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC005332.4-201ENST00000592752 579 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC073657.2-201ENST00000605661 303 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC011890.2-201ENST00000613393 294 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC004792.1-201ENST00000614523 137 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AC127459.3-201ENST00000624328 466 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 AL669831.3-213ENST00000636676 183 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 MAPK10-344ENST00000641718 3746 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 CLCA3P-203ENST00000490028 2781 ntBASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NPAS3Q8IXF0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RNU6-769P-201ENST00000384407 104 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AL034403.1-201ENST00000399414 885 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 MIR541-201ENST00000401360 84 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RN7SKP144-201ENST00000411108 279 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AL450992.3-201ENST00000413192 568 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AL353662.1-201ENST00000439099 327 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 SUMO2P10-201ENST00000452006 288 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 HMGB1P15-201ENST00000453854 435 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RPL39P38-201ENST00000467018 153 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 UBFD1P1-201ENST00000473259 814 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RN7SL326P-201ENST00000477493 296 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 FO393415.2-201ENST00000480085 343 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RPS27P27-201ENST00000498779 255 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 MTND6P8-201ENST00000503471 522 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RN7SKP238-201ENST00000516483 249 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 RNU6-566P-201ENST00000516790 107 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 IGKV2D-23-201ENST00000518179 286 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC025260.1-201ENST00000548858 430 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC093519.1-201ENST00000566109 298 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC015818.6-201ENST00000584274 634 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 BBIP1P1-201ENST00000602999 279 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AL512652.1-201ENST00000619006 500 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 PLCE1P1-201ENST00000622094 305 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 AC091812.1-201ENST00000432235 1948 ntBASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NPAS3Q8IXF0 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 AL359976.1-201ENST00000418655 3528 ntBASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.59□□□□□ -1.35
NPAS3Q8IXF0 MROH3P-201ENST00000435735 2676 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms