Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 RNU6-600P-201ENST00000362524 99 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 SNORA51.1-201ENST00000363243 140 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 SNORD96B-201ENST00000386148 79 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 SSXP10-201ENST00000402595 565 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 SFR1P1-201ENST00000403720 688 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 PTGES3P2-201ENST00000407942 482 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 RNA5SP56-201ENST00000410277 118 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 OR51A3P-201ENST00000413596 924 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 DNAJA1P1-201ENST00000425106 1187 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL390879.2-203ENST00000426943 1121 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC007559.1-201ENST00000428736 355 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 NANOGP6-201ENST00000429190 847 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 MTCO1P54-201ENST00000430139 712 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 ARF4P2-201ENST00000430209 526 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 RPL21P112-201ENST00000434403 463 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC006994.1-201ENST00000438212 839 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 PPIAP17-201ENST00000438507 471 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC074367.1-201ENST00000438685 1125 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC078857.1-201ENST00000469870 667 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC012158.1-204ENST00000483430 465 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC121161.1-201ENST00000510606 652 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 MTCO3P44-201ENST00000510977 541 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 IGKV2-23-201ENST00000518729 323 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 SOX5P1-201ENST00000524155 1127 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 MORF4L1P3-201ENST00000525966 950 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 GCSHP4-201ENST00000538792 439 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 IGHV3-29-201ENST00000604817 344 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL021368.1-201ENST00000607490 540 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AL669942.2-201ENST00000620352 697 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC024341.1-201ENST00000526444 1552 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC108467.2-201ENST00000617640 1597 ntBASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
MRPL55Q7Z7F7 AC108751.5-201ENST00000492880 1336 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AC117529.2-201ENST00000512159 2068 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AC073055.1-201ENST00000456901 1621 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 RNA5SP123-201ENST00000363244 119 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 RNU6-263P-201ENST00000363811 107 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 RNU6-619P-201ENST00000365146 108 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 RNU6-921P-201ENST00000384361 107 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 MIR195-201ENST00000385194 87 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 FCF1P5-201ENST00000406490 482 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 MIR1250-201ENST00000408098 113 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 RPL23AP27-201ENST00000415161 451 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 COX6B1P1-201ENST00000415962 213 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 BX664727.1-201ENST00000416024 466 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 SLC9B1P4-201ENST00000421957 1288 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 NRBF2P3-201ENST00000432731 865 ntBASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.94□□□□□ -1.94
MRPL55Q7Z7F7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms