Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 AC115286.1-201ENST00000604298 434 ntBASIC6.14□□□□□ -1.43
RNF43Q68DV7 RPL12P48-201ENST00000605620 304 ntBASIC6.14□□□□□ -1.43
RNF43Q68DV7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 AC139426.3-201ENST00000605648 2059 ntBASIC6.14□□□□□ -1.43
RNF43Q68DV7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.14□□□□□ -1.43
RNF43Q68DV7 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 AC004076.2-201ENST00000620532 3323 ntBASIC6.14□□□□□ -1.43
RNF43Q68DV7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RNF43Q68DV7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 ADAM24P-201ENST00000398655 2101 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 GAPDHP24-201ENST00000328713 983 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNU6-451P-201ENST00000362921 107 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNU1-19P-201ENST00000363306 165 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 Y_RNA.202-201ENST00000364083 110 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 RN7SKP128-201ENST00000364270 303 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 SNORA33.2-201ENST00000365413 134 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNU6-331P-201ENST00000384724 107 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 MIR217-201ENST00000384817 110 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNU6-1300P-201ENST00000391046 108 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF43Q68DV7 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNU6-77P-201ENST00000410554 91 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 RPA2P2-201ENST00000419698 796 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 PIGFP2-201ENST00000421400 651 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 Z93242.1-201ENST00000427102 353 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 ISCA1P6-201ENST00000427740 390 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL445928.1-201ENST00000435545 222 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC016691.1-201ENST00000441321 413 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 RPL23AP20-201ENST00000447965 421 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC104306.1-201ENST00000449702 371 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 DNAJB5P1-201ENST00000454004 806 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC112206.1-201ENST00000468416 477 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC090602.1-201ENST00000469695 252 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC083795.1-201ENST00000491760 320 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 CCDC34P1-201ENST00000507441 517 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC026782.1-201ENST00000512952 449 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNU6-123P-201ENST00000516163 102 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 TPM3P3-201ENST00000521343 354 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 WBP1LP3-201ENST00000523033 208 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 RGS5-218ENST00000526176 574 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC019322.1-201ENST00000571869 389 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 AC119674.1-207ENST00000641355 633 ntBASIC6.13□□□□□ -1.43
RNF43Q68DV7 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF43Q68DV7 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF43Q68DV7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF43Q68DV7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF43Q68DV7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RNF43Q68DV7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF43Q68DV7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF43Q68DV7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF43Q68DV7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF43Q68DV7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms