Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC117394.1-201ENST00000477323 567 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC013356.1-201ENST00000489027 564 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 RPL23AP73-201ENST00000492507 471 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC025674.1-201ENST00000507074 324 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 RNA5SP179-201ENST00000517284 121 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC008489.1-201ENST00000524271 483 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC006518.1-201ENST00000541449 943 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC011602.1-201ENST00000546484 331 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC010198.2-201ENST00000550612 259 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 AC091167.4-201ENST00000605079 184 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 CASC19-284ENST00000642142 1868 ntBASIC3.38□□□□□ -1.87
CCDC58Q4VC31 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC58Q4VC31 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AL672296.1-201ENST00000427780 2158 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 RNU4-7P-201ENST00000364758 141 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC114814.2-201ENST00000419195 485 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AL691447.1-201ENST00000419456 387 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 RPL23AP38-201ENST00000423801 469 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC012498.1-201ENST00000424037 437 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 COX6CP15-201ENST00000426313 211 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 DNAJC19P7-201ENST00000428811 344 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 MOB1AP1-201ENST00000430903 535 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 MTCO1P43-201ENST00000431831 488 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 MRPL50P1-201ENST00000431951 384 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 RPS3AP6-201ENST00000484430 795 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 FTH1P24-201ENST00000503502 462 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC110768.1-201ENST00000509222 400 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 TXNP6-201ENST00000510190 310 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 RNA5SP164-201ENST00000516533 110 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC138701.1-201ENST00000524329 714 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC234771.5-201ENST00000600161 514 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 MIR7703-201ENST00000620784 77 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 AC118273.1-201ENST00000525324 3006 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC58Q4VC31 CASC19-261ENST00000641853 1638 ntBASIC3.37□□□□□ -1.87
CCDC58Q4VC31 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 PWAR6-201ENST00000552334 4618 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RNU6-398P-201ENST00000384143 109 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RNU6-225P-201ENST00000384613 103 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 HMGB1P10-201ENST00000395823 563 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RN7SKP278-201ENST00000410504 342 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 SNORA57.3-201ENST00000411095 141 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 CBX1P4-201ENST00000439415 457 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.36□□□□□ -1.87
CCDC58Q4VC31 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC58Q4VC31 RPL5P23-201ENST00000496040 868 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms