Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.49□□□□□ -1.69
RPS3AP61247 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 MTCO2P17-201ENST00000424336 677 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC093414.1-201ENST00000434712 514 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.49□□□□□ -1.69
RPS3AP61247 RPS29P9-201ENST00000440360 171 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.49□□□□□ -1.69
RPS3AP61247 HIGD1AP8-201ENST00000453927 274 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.49□□□□□ -1.69
RPS3AP61247 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.49□□□□□ -1.69
RPS3AP61247 SNORD11.1-201ENST00000459482 85 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPS3AP61247 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.49□□□□□ -1.69
RPS3AP61247 MTCYBP16-201ENST00000509187 1129 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.49□□□□□ -1.69
RPS3AP61247 RNU6-311P-201ENST00000516224 102 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 RN7SKP277-201ENST00000516895 283 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 RN7SKP234-201ENST00000517173 224 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC087808.1-201ENST00000520501 361 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.49□□□□□ -1.69
RPS3AP61247 OR5D15P-201ENST00000531671 942 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.49□□□□□ -1.69
RPS3AP61247 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.49□□□□□ -1.69
RPS3AP61247 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.49□□□□□ -1.69
RPS3AP61247 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.49□□□□□ -1.69
RPS3AP61247 MIR3934-201ENST00000579806 107 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 AL390838.2-201ENST00000602394 274 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 MEMO1P5-201ENST00000604810 406 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AL450336.1-201ENST00000605180 586 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC010680.4-201ENST00000605334 543 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.49□□□□□ -1.69
RPS3AP61247 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.49□□□□□ -1.69
RPS3AP61247 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPS3AP61247 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPS3AP61247 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPS3AP61247 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
RPS3AP61247 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPS3AP61247 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RPS3AP61247 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPS3AP61247 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPS3AP61247 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 IQCB2P-201ENST00000401788 1633 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 NACA3P-201ENST00000359690 648 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 RN7SKP95-201ENST00000362860 303 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RPS3AP61247 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 RNU6-636P-201ENST00000384598 107 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 MIR649-201ENST00000384843 97 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 RNA5SP39-201ENST00000411245 120 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AL136133.1-201ENST00000413694 376 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.48□□□□□ -1.69
RPS3AP61247 SSR1P2-201ENST00000415208 787 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 COX6B1P1-201ENST00000415962 213 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 QRSL1P2-201ENST00000418582 964 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.48□□□□□ -1.69
RPS3AP61247 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.48□□□□□ -1.69
RPS3AP61247 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC005345.1-201ENST00000431868 217 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 BX323845.1-201ENST00000432417 179 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC084290.1-201ENST00000434995 374 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC112498.1-201ENST00000444401 332 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 Z77249.1-201ENST00000444622 1175 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 BX276092.4-201ENST00000452056 248 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.48□□□□□ -1.69
RPS3AP61247 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC114322.1-201ENST00000506771 926 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC104057.1-201ENST00000515547 497 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.48□□□□□ -1.69
RPS3AP61247 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.48□□□□□ -1.69
RPS3AP61247 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.48□□□□□ -1.69
RPS3AP61247 AP001189.2-201ENST00000527320 189 ntBASIC4.48□□□□□ -1.69
RPS3AP61247 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RPS3AP61247 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms