Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 Y_RNA.11-201ENST00000362375 109 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 Y_RNA.38-201ENST00000362617 102 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RNU6-181P-201ENST00000363225 107 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RNA5SP514-201ENST00000363717 111 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RN7SKP292-201ENST00000365522 317 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RNU6-483P-201ENST00000384088 108 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 Y_RNA.481-201ENST00000384373 102 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AL031985.1-201ENST00000392713 418 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AL356421.1-201ENST00000403255 413 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AL121835.1-201ENST00000404250 354 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RPL31P52-201ENST00000407532 367 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RNA5SP251-201ENST00000410614 137 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RNU2-41P-201ENST00000410991 178 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AC126120.1-201ENST00000431082 470 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA1P56159 AC104850.1-201ENST00000435940 476 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.3□□□□□ -1.56
GFRA1P56159 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GFRA1P56159 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.3□□□□□ -1.56
GFRA1P56159 RPL23AP20-201ENST00000447965 421 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AP1S2P1-201ENST00000457344 379 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AL445687.2-201ENST00000458156 728 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RPS17P15-201ENST00000475609 349 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RPL38P3-201ENST00000484463 213 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.3□□□□□ -1.56
GFRA1P56159 AC008628.2-201ENST00000502605 298 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.3□□□□□ -1.56
GFRA1P56159 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 SNORA81.2-201ENST00000516868 170 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 RNU6-445P-201ENST00000516949 107 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA1P56159 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.3□□□□□ -1.56
GFRA1P56159 AC090616.5-202ENST00000582111 297 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA1P56159 RPL12P25-202ENST00000598100 674 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 NRBF2P5-201ENST00000603087 788 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AL391646.1-201ENST00000603860 190 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 FAM27E4-201ENST00000605259 342 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AC008945.2-201ENST00000606056 604 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 U1.25-201ENST00000614085 162 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AC104260.1-201ENST00000616660 539 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 AP006248.2-201ENST00000623309 592 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.3□□□□□ -1.56
GFRA1P56159 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.3□□□□□ -1.56
GFRA1P56159 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.3□□□□□ -1.56
GFRA1P56159 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GFRA1P56159 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 AL354685.2-201ENST00000448218 1447 ntBASIC5.3□□□□□ -1.56
GFRA1P56159 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
GFRA1P56159 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.3□□□□□ -1.56
GFRA1P56159 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GFRA1P56159 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 ELL2P4-201ENST00000446870 1376 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC079753.1-201ENST00000623243 3868 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 OR13C1P-202ENST00000641378 2919 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 CBX3P1-201ENST00000325243 554 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
GFRA1P56159 MIR375-201ENST00000362103 64 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 RNU6-1243P-201ENST00000364028 107 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 RNA5SP122-201ENST00000384457 108 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 RN7SKP29-201ENST00000410957 272 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AL359704.1-201ENST00000411586 781 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 MRPL53P1-201ENST00000414323 319 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC009302.1-201ENST00000417147 390 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 HMGB3P20-201ENST00000417997 600 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 RPL31P45-201ENST00000419532 356 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.29□□□□□ -1.56
GFRA1P56159 AL590399.4-201ENST00000436561 601 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC105402.2-201ENST00000438503 358 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 SDCBPP1-201ENST00000440192 890 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC114755.5-201ENST00000447760 831 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 PRPF38AP1-201ENST00000451976 933 ntBASIC5.29□□□□□ -1.56
GFRA1P56159 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.29□□□□□ -1.56
GFRA1P56159 AC093166.4-201ENST00000457867 318 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms