Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 AL354976.1-201ENST00000613843 387 ntBASIC4.39□□□□□ -1.71
CDH12P55289 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.39□□□□□ -1.71
CDH12P55289 MIR6729-201ENST00000618194 65 ntBASIC4.39□□□□□ -1.71
CDH12P55289 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 SMG1P6-201ENST00000532337 2930 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CDH12P55289 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 AC000123.3-201ENST00000624029 4975 ntBASIC4.39□□□□□ -1.71
CDH12P55289 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CDH12P55289 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDH12P55289 AC093775.1-201ENST00000624154 1868 ntBASIC4.39□□□□□ -1.71
CDH12P55289 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.39□□□□□ -1.71
CDH12P55289 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.39□□□□□ -1.71
CDH12P55289 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDH12P55289 AC009313.2-201ENST00000417893 1941 ntBASIC4.38□□□□□ -1.71
CDH12P55289 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH12P55289 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH12P55289 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH12P55289 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH12P55289 AL391994.1-201ENST00000254724 282 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RNU5D-1-201ENST00000363299 116 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RNU6-1200P-201ENST00000384162 107 ntBASIC4.38□□□□□ -1.71
CDH12P55289 SNORD116-23-201ENST00000384645 92 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RNU6-1300P-201ENST00000391046 108 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RNU2-42P-201ENST00000410697 113 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RNU6-272P-201ENST00000411028 104 ntBASIC4.38□□□□□ -1.71
CDH12P55289 CEACAMP8-201ENST00000413902 580 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AC009237.10-201ENST00000414112 510 ntBASIC4.38□□□□□ -1.71
CDH12P55289 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH12P55289 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH12P55289 MORF4L1P6-201ENST00000418771 268 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 Z74021.1-201ENST00000423610 407 ntBASIC4.38□□□□□ -1.71
CDH12P55289 PPIAP17-201ENST00000438507 471 ntBASIC4.38□□□□□ -1.71
CDH12P55289 FHP1-201ENST00000442741 703 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH12P55289 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 RPL12P26-201ENST00000452430 487 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RPL37P3-201ENST00000456825 293 ntBASIC4.38□□□□□ -1.71
CDH12P55289 RN7SL727P-201ENST00000482164 296 ntBASIC4.38□□□□□ -1.71
CDH12P55289 ACTG1P13-201ENST00000486987 1043 ntBASIC4.38□□□□□ -1.71
CDH12P55289 UBA52P3-201ENST00000491303 382 ntBASIC4.38□□□□□ -1.71
CDH12P55289 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.38□□□□□ -1.71
CDH12P55289 ARL4AP1-201ENST00000503220 705 ntBASIC4.38□□□□□ -1.71
CDH12P55289 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 AC008885.2-201ENST00000509506 930 ntBASIC4.38□□□□□ -1.71
CDH12P55289 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH12P55289 RPS27AP18-201ENST00000515536 459 ntBASIC4.38□□□□□ -1.71
CDH12P55289 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 HIGD1AP6-201ENST00000521833 279 ntBASIC4.38□□□□□ -1.71
CDH12P55289 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.38□□□□□ -1.71
CDH12P55289 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH12P55289 AC015912.2-201ENST00000571053 181 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH12P55289 VN1R84P-201ENST00000593697 235 ntBASIC4.38□□□□□ -1.71
CDH12P55289 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.38□□□□□ -1.71
CDH12P55289 AC103881.1-201ENST00000603476 538 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.38□□□□□ -1.71
CDH12P55289 AC007497.1-201ENST00000610421 561 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AL121890.2-201ENST00000617644 465 ntBASIC4.38□□□□□ -1.71
CDH12P55289 MIR6826-201ENST00000617808 98 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AC069209.1-201ENST00000619282 651 ntBASIC4.38□□□□□ -1.71
CDH12P55289 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDH12P55289 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH12P55289 AC124312.6-202ENST00000623624 418 ntBASIC4.38□□□□□ -1.71
CDH12P55289 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDH12P55289 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CDH12P55289 AC092079.1-201ENST00000558620 1985 ntBASIC4.38□□□□□ -1.71
CDH12P55289 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDH12P55289 CASC19-204ENST00000641001 2055 ntBASIC4.37□□□□□ -1.71
CDH12P55289 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 EOGT-210ENST00000615922 1931 ntBASIC4.37□□□□□ -1.71
CDH12P55289 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 SNORA51.1-201ENST00000363243 140 ntBASIC4.37□□□□□ -1.71
CDH12P55289 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
CDH12P55289 RNU6-553P-201ENST00000364047 96 ntBASIC4.37□□□□□ -1.71
CDH12P55289 RNU6-621P-201ENST00000364752 109 ntBASIC4.37□□□□□ -1.71
CDH12P55289 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CDH12P55289 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDH12P55289 SNORD116-9-201ENST00000384000 95 ntBASIC4.37□□□□□ -1.71
CDH12P55289 SNORD116-3-201ENST00000384287 95 ntBASIC4.37□□□□□ -1.71
CDH12P55289 SNORD116-7-201ENST00000384404 95 ntBASIC4.37□□□□□ -1.71
CDH12P55289 SNORD116-5-201ENST00000384462 95 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms