Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC017007.4-201ENST00000503353 1352 ntBASIC4.3□□□□□ -1.72
NUP98P52948 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP98P52948 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.3□□□□□ -1.72
NUP98P52948 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 AF228730.2-201ENST00000438784 848 ntBASIC4.3□□□□□ -1.72
NUP98P52948 ANP32BP2-201ENST00000454525 545 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 RPL6P9-201ENST00000466502 859 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AC112198.1-201ENST00000505369 1220 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 AC016550.3-201ENST00000515706 767 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 AC020914.4-201ENST00000597690 277 ntBASIC4.3□□□□□ -1.72
NUP98P52948 AL033523.1-201ENST00000605153 153 ntBASIC4.3□□□□□ -1.72
NUP98P52948 BNIP3P19-201ENST00000605397 577 ntBASIC4.3□□□□□ -1.72
NUP98P52948 YPEL5P2-201ENST00000605553 359 ntBASIC4.3□□□□□ -1.72
NUP98P52948 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP98P52948 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NUP98P52948 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP98P52948 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP98P52948 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP98P52948 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NUP98P52948 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP98P52948 BX119904.1-201ENST00000432026 348 ntBASIC4.29□□□□□ -1.72
NUP98P52948 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP98P52948 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP98P52948 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP98P52948 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP98P52948 NCAPGP2-201ENST00000557911 754 ntBASIC4.29□□□□□ -1.72
NUP98P52948 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP98P52948 AL360157.1-201ENST00000565962 87 ntBASIC4.29□□□□□ -1.72
NUP98P52948 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.29□□□□□ -1.72
NUP98P52948 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP98P52948 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP98P52948 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
NUP98P52948 AC009464.1-201ENST00000615731 469 ntBASIC4.29□□□□□ -1.72
NUP98P52948 AL596275.2-204ENST00000641628 552 ntBASIC4.29□□□□□ -1.72
NUP98P52948 AL596275.2-206ENST00000641957 626 ntBASIC4.29□□□□□ -1.72
NUP98P52948 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP98P52948 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP98P52948 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP98P52948 Z82217.1-201ENST00000625157 8149 ntBASIC4.29□□□□□ -1.72
NUP98P52948 AC073073.2-201ENST00000609827 2578 ntBASIC4.29□□□□□ -1.72
NUP98P52948 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP98P52948 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP98P52948 AL035425.3-201ENST00000564206 4996 ntBASIC4.28□□□□□ -1.72
NUP98P52948 RNU1-70P-201ENST00000362618 164 ntBASIC4.28□□□□□ -1.72
NUP98P52948 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NUP98P52948 SNORA48.5-201ENST00000391143 135 ntBASIC4.28□□□□□ -1.72
NUP98P52948 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.28□□□□□ -1.72
NUP98P52948 RNA5SP229-201ENST00000410809 99 ntBASIC4.28□□□□□ -1.72
NUP98P52948 BX842559.1-201ENST00000419615 532 ntBASIC4.28□□□□□ -1.72
NUP98P52948 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP98P52948 RPL32P34-201ENST00000486380 400 ntBASIC4.28□□□□□ -1.72
NUP98P52948 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP98P52948 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.28□□□□□ -1.72
NUP98P52948 AC084036.1-201ENST00000609190 508 ntBASIC4.28□□□□□ -1.72
NUP98P52948 AC105227.2-201ENST00000615075 605 ntBASIC4.28□□□□□ -1.72
NUP98P52948 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NUP98P52948 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
NUP98P52948 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NUP98P52948 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
NUP98P52948 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 HMGN1P24-201ENST00000412282 298 ntBASIC4.28□□□□□ -1.72
NUP98P52948 NMD3P1-201ENST00000439704 1488 ntBASIC4.28□□□□□ -1.72
NUP98P52948 AL356535.1-201ENST00000440335 398 ntBASIC4.28□□□□□ -1.72
NUP98P52948 AC097262.1-201ENST00000452559 548 ntBASIC4.28□□□□□ -1.72
NUP98P52948 RPS26P24-201ENST00000497656 331 ntBASIC4.28□□□□□ -1.72
NUP98P52948 HSPA8P19-201ENST00000505359 1517 ntBASIC4.28□□□□□ -1.72
NUP98P52948 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NUP98P52948 MYL12AP1-201ENST00000518490 515 ntBASIC4.28□□□□□ -1.72
NUP98P52948 AC011270.1-201ENST00000558606 583 ntBASIC4.28□□□□□ -1.72
NUP98P52948 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.28□□□□□ -1.72
NUP98P52948 LSM1P2-201ENST00000604911 322 ntBASIC4.28□□□□□ -1.72
NUP98P52948 AL137843.1-201ENST00000605078 385 ntBASIC4.28□□□□□ -1.72
NUP98P52948 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NUP98P52948 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUP98P52948 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
NUP98P52948 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NUP98P52948 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NUP98P52948 MIR634-201ENST00000385208 97 ntBASIC4.27□□□□□ -1.73
NUP98P52948 Z99755.1-201ENST00000414048 380 ntBASIC4.27□□□□□ -1.73
NUP98P52948 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP98P52948 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.27□□□□□ -1.73
NUP98P52948 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP98P52948 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP98P52948 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.27□□□□□ -1.73
NUP98P52948 AC004069.2-201ENST00000505438 1114 ntBASIC4.27□□□□□ -1.73
NUP98P52948 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.27□□□□□ -1.73
NUP98P52948 PTGES3P3-201ENST00000511479 482 ntBASIC4.27□□□□□ -1.73
NUP98P52948 GMPSP1-201ENST00000514075 579 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms