Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 KLRA1P-201ENST00000503499 986 ntBASIC4.42□□□□□ -1.7
SOX2P48431 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 RN7SKP96-201ENST00000516948 297 ntBASIC4.42□□□□□ -1.7
SOX2P48431 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AC060788.1-201ENST00000521318 469 ntBASIC4.42□□□□□ -1.7
SOX2P48431 ARL2BPP5-201ENST00000523141 481 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC027544.3-201ENST00000535082 757 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX2P48431 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.42□□□□□ -1.7
SOX2P48431 AC020914.6-201ENST00000594327 272 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC004987.4-201ENST00000603383 338 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC083899.3-201ENST00000603413 594 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC080078.2-201ENST00000603766 501 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC024560.3-201ENST00000608482 349 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AL391497.1-201ENST00000608671 547 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 AC106028.5-201ENST00000610332 395 ntBASIC4.42□□□□□ -1.7
SOX2P48431 AC068792.1-201ENST00000621354 417 ntBASIC4.42□□□□□ -1.7
SOX2P48431 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 AC092192.1-201ENST00000633154 1018 ntBASIC4.42□□□□□ -1.7
SOX2P48431 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.42□□□□□ -1.7
SOX2P48431 AC006927.3-201ENST00000638789 384 ntBASIC4.42□□□□□ -1.7
SOX2P48431 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.42□□□□□ -1.7
SOX2P48431 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SOX2P48431 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SOX2P48431 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SOX2P48431 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 AC104260.2-201ENST00000623551 3497 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC021242.1-201ENST00000507315 2035 ntBASIC4.41□□□□□ -1.7
SOX2P48431 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 RPL21P132-201ENST00000331267 462 ntBASIC4.41□□□□□ -1.7
SOX2P48431 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 RNU6-251P-201ENST00000363235 104 ntBASIC4.41□□□□□ -1.7
SOX2P48431 RNU6-374P-201ENST00000364146 108 ntBASIC4.41□□□□□ -1.7
SOX2P48431 RNU6-444P-201ENST00000383988 108 ntBASIC4.41□□□□□ -1.7
SOX2P48431 MIR600-201ENST00000385007 98 ntBASIC4.41□□□□□ -1.7
SOX2P48431 RNA5SP339-201ENST00000390987 122 ntBASIC4.41□□□□□ -1.7
SOX2P48431 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 PGBD4P8-201ENST00000412993 562 ntBASIC4.41□□□□□ -1.7
SOX2P48431 MTCYBP38-201ENST00000417160 1123 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 LINC00993-201ENST00000420453 540 ntBASIC4.41□□□□□ -1.7
SOX2P48431 MTCO2P34-201ENST00000421994 607 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX2P48431 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.41□□□□□ -1.7
SOX2P48431 AC093698.1-201ENST00000423843 571 ntBASIC4.41□□□□□ -1.7
SOX2P48431 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX2P48431 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 AC092013.1-201ENST00000438795 332 ntBASIC4.41□□□□□ -1.7
SOX2P48431 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 MTCO1P19-201ENST00000443487 500 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 PTMAP3-201ENST00000447474 330 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 AL691482.1-201ENST00000453255 87 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AL133445.1-201ENST00000467051 452 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC007998.1-201ENST00000474156 672 ntBASIC4.41□□□□□ -1.7
SOX2P48431 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 AC013828.1-201ENST00000481845 158 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX2P48431 AC006499.5-201ENST00000505037 514 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX2P48431 SNX5P1-201ENST00000505757 1041 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC090071.1-201ENST00000507713 644 ntBASIC4.41□□□□□ -1.7
SOX2P48431 GTF2F2P1-201ENST00000511083 675 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.41□□□□□ -1.7
SOX2P48431 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 RPL23AP53-201ENST00000521854 457 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC239860.2-201ENST00000525886 270 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX2P48431 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.41□□□□□ -1.7
SOX2P48431 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SOX2P48431 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 AGGF1P4-201ENST00000568249 801 ntBASIC4.41□□□□□ -1.7
SOX2P48431 CYCSP40-201ENST00000575927 294 ntBASIC4.41□□□□□ -1.7
SOX2P48431 MIR3611-201ENST00000584484 83 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC022146.1-201ENST00000595307 847 ntBASIC4.41□□□□□ -1.7
SOX2P48431 SUGT1P3-202ENST00000604259 383 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AL031775.1-201ENST00000607014 887 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC012360.2-201ENST00000609349 391 ntBASIC4.41□□□□□ -1.7
SOX2P48431 AC079228.1-201ENST00000624774 1049 ntBASIC4.41□□□□□ -1.7
SOX2P48431 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.41□□□□□ -1.7
SOX2P48431 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.41□□□□□ -1.7
SOX2P48431 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms