Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RPL7P57-201ENST00000423238 740 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RPP40P1-201ENST00000426762 456 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 CFL1P1-202ENST00000432948 411 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 Z83846.1-201ENST00000446798 265 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RPL5P24-201ENST00000463742 885 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RPS26P28-201ENST00000470806 348 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AP000563.1-201ENST00000490865 758 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 RN7SL244P-201ENST00000493405 297 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC011352.3-201ENST00000505162 593 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 MTCYBP16-201ENST00000509187 1129 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 COX6B1P5-201ENST00000509843 249 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC109471.1-201ENST00000511631 612 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RNU6-885P-201ENST00000516607 104 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC100770.1-201ENST00000532310 322 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC087465.1-201ENST00000560574 245 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC007225.2-201ENST00000562529 256 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC023813.2-201ENST00000564321 469 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC145350.1-201ENST00000567426 208 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL121834.1-201ENST00000572284 509 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC008759.1-201ENST00000589783 983 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 RPL7P50-201ENST00000600588 727 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 BNIP3P26-201ENST00000600827 554 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.86□□□□□ -1.79
NKX2-1P43699 DUXAP3-201ENST00000603616 594 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 IMMP1LP3-201ENST00000604197 224 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC010424.2-201ENST00000607594 443 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL450489.1-201ENST00000612071 468 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC013470.4-201ENST00000619978 986 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 WWOX-217ENST00000620008 450 ntTSL 2 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AC000123.2-201ENST00000623124 461 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 AC120349.3-201ENST00000624377 529 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 AL122126.1-201ENST00000546905 1318 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 ZNF876P-202ENST00000398732 1485 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 Z99496.1-201ENST00000469424 1477 ntBASIC3.86□□□□□ -1.79
NKX2-1P43699 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
NKX2-1P43699 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NKX2-1P43699 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC087190.4-201ENST00000574616 8334 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NKX2-1P43699 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NKX2-1P43699 SNORD116.1-201ENST00000365628 92 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NKX2-1P43699 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NKX2-1P43699 ATP5F1P2-201ENST00000398143 760 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AL133264.1-201ENST00000407157 562 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 MIR1286-201ENST00000408112 78 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 SNORA11.3-201ENST00000408471 128 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 RN7SKP278-201ENST00000410504 342 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 RPL35AP24-201ENST00000413846 330 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 RPL31P2-201ENST00000413849 377 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC096632.1-201ENST00000427395 310 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 YWHAZP8-201ENST00000436935 731 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.85□□□□□ -1.79
NKX2-1P43699 EXTL2P1-201ENST00000446218 416 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AC016724.1-201ENST00000453215 421 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 AC087879.1-201ENST00000474343 374 ntBASIC3.85□□□□□ -1.79
NKX2-1P43699 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.85□□□□□ -1.79
NKX2-1P43699 RN7SL214P-201ENST00000487317 265 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms