Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.73□□□□□ -1.81
HTTP42858 AC023598.1-201ENST00000472521 361 ntBASIC3.73□□□□□ -1.81
HTTP42858 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.73□□□□□ -1.81
HTTP42858 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.73□□□□□ -1.81
HTTP42858 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.73□□□□□ -1.81
HTTP42858 AC138832.1-201ENST00000522871 556 ntBASIC3.73□□□□□ -1.81
HTTP42858 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.73□□□□□ -1.81
HTTP42858 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.73□□□□□ -1.81
HTTP42858 ATP1B3P1-201ENST00000605365 821 ntBASIC3.73□□□□□ -1.81
HTTP42858 AC010149.2-201ENST00000637608 315 ntBASIC3.73□□□□□ -1.81
HTTP42858 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
HTTP42858 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HTTP42858 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HTTP42858 AC092435.3-201ENST00000565538 3654 ntBASIC3.73□□□□□ -1.81
HTTP42858 BMS1P22-201ENST00000414726 313 ntBASIC3.73□□□□□ -1.81
HTTP42858 BX119904.1-201ENST00000432026 348 ntBASIC3.73□□□□□ -1.81
HTTP42858 ARL4AP3-201ENST00000441452 574 ntBASIC3.73□□□□□ -1.81
HTTP42858 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.73□□□□□ -1.81
HTTP42858 AC026801.2-201ENST00000515352 425 ntBASIC3.73□□□□□ -1.81
HTTP42858 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.73□□□□□ -1.81
HTTP42858 SNORD91B-202ENST00000608459 222 ntBASIC3.73□□□□□ -1.81
HTTP42858 CCDC162P-202ENST00000368966 6751 ntBASIC3.73□□□□□ -1.81
HTTP42858 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HTTP42858 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
HTTP42858 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HTTP42858 Z93242.1-201ENST00000427102 353 ntBASIC3.73□□□□□ -1.81
HTTP42858 FCF1P8-201ENST00000510322 597 ntBASIC3.73□□□□□ -1.81
HTTP42858 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 RPL6P21-201ENST00000418672 846 ntBASIC3.72□□□□□ -1.81
HTTP42858 AL035407.1-201ENST00000429211 571 ntBASIC3.72□□□□□ -1.81
HTTP42858 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.72□□□□□ -1.81
HTTP42858 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.72□□□□□ -1.81
HTTP42858 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.72□□□□□ -1.81
HTTP42858 AC005008.1-201ENST00000456151 612 ntBASIC3.72□□□□□ -1.81
HTTP42858 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.72□□□□□ -1.81
HTTP42858 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
HTTP42858 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.72□□□□□ -1.81
HTTP42858 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.72□□□□□ -1.81
HTTP42858 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HTTP42858 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.72□□□□□ -1.81
HTTP42858 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.72□□□□□ -1.81
HTTP42858 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
HTTP42858 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.72□□□□□ -1.81
HTTP42858 AL139413.1-201ENST00000421309 217 ntBASIC3.72□□□□□ -1.81
HTTP42858 AC140076.1-201ENST00000449897 361 ntBASIC3.72□□□□□ -1.81
HTTP42858 AC084357.1-201ENST00000473404 255 ntBASIC3.72□□□□□ -1.81
HTTP42858 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.72□□□□□ -1.81
HTTP42858 CYP4A43P-201ENST00000568156 121 ntBASIC3.72□□□□□ -1.81
HTTP42858 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
HTTP42858 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.72□□□□□ -1.81
HTTP42858 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HTTP42858 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.71□□□□□ -1.81
HTTP42858 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HTTP42858 RNA5SP42-201ENST00000364278 115 ntBASIC3.71□□□□□ -1.82
HTTP42858 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.71□□□□□ -1.82
HTTP42858 RPS20P32-201ENST00000456044 356 ntBASIC3.71□□□□□ -1.82
HTTP42858 HMGN2P7-201ENST00000456186 273 ntBASIC3.71□□□□□ -1.82
HTTP42858 AC128716.1-201ENST00000475129 166 ntBASIC3.71□□□□□ -1.82
HTTP42858 KLKP1-201ENST00000595979 403 ntBASIC3.71□□□□□ -1.82
HTTP42858 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.71□□□□□ -1.82
HTTP42858 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 CR383658.2-201ENST00000547576 1525 ntBASIC3.71□□□□□ -1.82
HTTP42858 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.71□□□□□ -1.82
HTTP42858 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HTTP42858 AL672296.1-201ENST00000427780 2158 ntBASIC3.71□□□□□ -1.82
HTTP42858 Y_RNA.238-201ENST00000364441 102 ntBASIC3.71□□□□□ -1.82
HTTP42858 SEPT7P8-201ENST00000413308 775 ntBASIC3.71□□□□□ -1.82
HTTP42858 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.71□□□□□ -1.82
HTTP42858 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.71□□□□□ -1.82
HTTP42858 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.71□□□□□ -1.82
HTTP42858 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.71□□□□□ -1.82
HTTP42858 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HTTP42858 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.71□□□□□ -1.82
HTTP42858 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HTTP42858 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HTTP42858 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HTTP42858 AP002884.2-201ENST00000471647 395 ntBASIC3.7□□□□□ -1.82
HTTP42858 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.7□□□□□ -1.82
HTTP42858 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.7□□□□□ -1.82
HTTP42858 OR51C1P-201ENST00000608504 942 ntBASIC3.7□□□□□ -1.82
HTTP42858 AL162574.2-201ENST00000614618 657 ntBASIC3.7□□□□□ -1.82
HTTP42858 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.7□□□□□ -1.82
HTTP42858 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
HTTP42858 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HTTP42858 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HTTP42858 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC3.7□□□□□ -1.82
HTTP42858 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HTTP42858 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms