Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 CR769776.1-201ENST00000441254 787 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 VN1R34P-201ENST00000447387 883 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 OR51B8P-201ENST00000449892 769 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AL035407.2-201ENST00000454090 378 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 PTGES3P5-201ENST00000455109 434 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AC134050.1-201ENST00000495088 933 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.42□□□□□ -1.54
COL15A1P39059 AP000859.1-201ENST00000525536 307 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.42□□□□□ -1.54
COL15A1P39059 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 Z98200.1-201ENST00000607298 470 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 CASC19-204ENST00000641001 2055 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL15A1P39059 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL15A1P39059 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL15A1P39059 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
COL15A1P39059 AP001642.1-201ENST00000624727 2117 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC126323.6-202ENST00000568092 3511 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL15A1P39059 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL15A1P39059 SNORA70.4-201ENST00000365509 134 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 HMGB3P31-201ENST00000413333 595 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC004448.2-201ENST00000422360 586 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 OR6K4P-201ENST00000423179 955 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 OR8F1P-201ENST00000425243 930 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.42□□□□□ -1.54
COL15A1P39059 DPY19L1P2-201ENST00000426647 915 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 RPL23AP25-201ENST00000430973 463 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.42□□□□□ -1.54
COL15A1P39059 AL358232.1-201ENST00000448030 501 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
COL15A1P39059 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.42□□□□□ -1.54
COL15A1P39059 DEFB109F-201ENST00000491870 277 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.42□□□□□ -1.54
COL15A1P39059 UBTFL10-201ENST00000528532 562 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.42□□□□□ -1.54
COL15A1P39059 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC124068.1-201ENST00000563131 678 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.42□□□□□ -1.54
COL15A1P39059 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.42□□□□□ -1.54
COL15A1P39059 AC096586.1-201ENST00000610267 561 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 MIR7151-201ENST00000617477 60 ntBASIC5.42□□□□□ -1.54
COL15A1P39059 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
COL15A1P39059 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL15A1P39059 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 AL606537.1-201ENST00000607258 2011 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.41□□□□□ -1.54
COL15A1P39059 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
COL15A1P39059 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 AC005005.4-201ENST00000623789 16698 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
COL15A1P39059 RNA5SP22-201ENST00000365393 109 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.41□□□□□ -1.54
COL15A1P39059 RNU6-224P-201ENST00000384055 107 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 SNORD116-12-201ENST00000384468 92 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 RNY3P9-201ENST00000384727 106 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 AP000357.1-201ENST00000409926 1165 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 RNA5SP498-201ENST00000411342 120 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.41□□□□□ -1.54
COL15A1P39059 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.41□□□□□ -1.54
COL15A1P39059 AC022022.1-201ENST00000430304 178 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 AL445584.1-201ENST00000431451 330 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 MTCO2P20-201ENST00000437339 673 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 AL592437.1-201ENST00000443781 492 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.41□□□□□ -1.54
COL15A1P39059 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.41□□□□□ -1.54
COL15A1P39059 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.41□□□□□ -1.54
COL15A1P39059 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.41□□□□□ -1.54
COL15A1P39059 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL15A1P39059 AC104164.2-201ENST00000496953 495 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 MTCYBP35-201ENST00000503630 1137 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 AC010460.1-201ENST00000507087 466 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.41□□□□□ -1.54
COL15A1P39059 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.41□□□□□ -1.54
COL15A1P39059 RNU6-1004P-201ENST00000516584 111 ntBASIC5.41□□□□□ -1.54
COL15A1P39059 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms