Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 MRPL50P2-201ENST00000416821 482 ntBASIC6.76□□□□□ -1.33
RFX1P22670 RPL31P45-201ENST00000419532 356 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 USP24P1-201ENST00000433802 779 ntBASIC6.76□□□□□ -1.33
RFX1P22670 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
RFX1P22670 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 AC093767.1-201ENST00000504523 156 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC139783.2-201ENST00000504847 1145 ntBASIC6.76□□□□□ -1.33
RFX1P22670 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 ARL1-211ENST00000551828 776 ntTSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 AC051619.2-201ENST00000559063 397 ntBASIC6.76□□□□□ -1.33
RFX1P22670 CYCSP38-201ENST00000559840 322 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC055876.1-202ENST00000567053 138 ntBASIC6.76□□□□□ -1.33
RFX1P22670 RN7SL475P-201ENST00000583379 298 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC027229.1-201ENST00000583887 253 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 GLYATL1P2-202ENST00000588046 902 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.76□□□□□ -1.33
RFX1P22670 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 AC138649.5-201ENST00000637456 137 ntBASIC6.76□□□□□ -1.33
RFX1P22670 AC024614.3-201ENST00000637860 256 ntBASIC6.76□□□□□ -1.33
RFX1P22670 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.76□□□□□ -1.33
RFX1P22670 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
RFX1P22670 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
RFX1P22670 Z95114.1-201ENST00000624264 14574 ntBASIC6.76□□□□□ -1.33
RFX1P22670 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RFX1P22670 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 PHKBP1-201ENST00000450951 1951 ntBASIC6.75□□□□□ -1.33
RFX1P22670 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 AC091305.2-201ENST00000624049 1576 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC034229.2-201ENST00000566945 2508 ntBASIC6.75□□□□□ -1.33
RFX1P22670 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
RFX1P22670 OR52B1P-201ENST00000316506 909 ntBASIC6.75□□□□□ -1.33
RFX1P22670 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 RNU6-456P-201ENST00000384493 107 ntBASIC6.75□□□□□ -1.33
RFX1P22670 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.75□□□□□ -1.33
RFX1P22670 RN7SKP151-201ENST00000410230 316 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RNU2-50P-201ENST00000410494 143 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RNU4-64P-201ENST00000410795 131 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RNU6-603P-201ENST00000411403 107 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AL035422.1-201ENST00000414193 397 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 SDCBPP3-201ENST00000419629 891 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RPS15AP30-201ENST00000420976 390 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 RPL12P12-201ENST00000424633 501 ntBASIC6.75□□□□□ -1.33
RFX1P22670 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 AC008850.1-201ENST00000427546 362 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC108734.1-201ENST00000439549 399 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 RPL31P15-201ENST00000449770 338 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RPS20P24-201ENST00000457473 361 ntBASIC6.75□□□□□ -1.33
RFX1P22670 NXT1P1-201ENST00000458481 316 ntBASIC6.75□□□□□ -1.33
RFX1P22670 snoU13.7-201ENST00000459220 104 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RPS20P20-201ENST00000460498 340 ntBASIC6.75□□□□□ -1.33
RFX1P22670 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.75□□□□□ -1.33
RFX1P22670 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
RFX1P22670 RPS4XP18-201ENST00000495480 763 ntBASIC6.75□□□□□ -1.33
RFX1P22670 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.75□□□□□ -1.33
RFX1P22670 RNA5SP116-201ENST00000516132 98 ntBASIC6.75□□□□□ -1.33
RFX1P22670 RNU6-835P-201ENST00000516974 104 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC027308.1-201ENST00000517993 110 ntBASIC6.75□□□□□ -1.33
RFX1P22670 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.75□□□□□ -1.33
RFX1P22670 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms