Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 P2RY10P2-201ENST00000416730 913 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AL592293.2-201ENST00000422292 996 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AL513175.1-201ENST00000431492 780 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 CKS1BP5-201ENST00000434172 273 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AL590762.3-201ENST00000436372 640 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 RPL23AP33-201ENST00000442301 452 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 RPL6P5-201ENST00000445678 828 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AP000873.1-201ENST00000463987 400 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC011276.1-201ENST00000469688 323 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 CYCSP20-201ENST00000473154 315 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 RPL35P6-201ENST00000490024 372 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 SNX5P1-201ENST00000505757 1041 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC025674.1-201ENST00000507074 324 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC093755.1-201ENST00000512950 1023 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC018797.3-201ENST00000513388 1241 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 RNU4-60P-201ENST00000517239 135 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 UBTFL9-201ENST00000534504 1148 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 FAM27D1-201ENST00000612308 341 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 AC097460.3-201ENST00000623099 442 ntBASIC4.31□□□□□ -1.72
HLA-DPA1P20036 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.31□□□□□ -1.72
HLA-DPA1P20036 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 ENSAP1-201ENST00000392855 326 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 DSTNP4-201ENST00000399472 474 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AL583835.1-201ENST00000399570 407 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 RNU4-25P-201ENST00000410569 230 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 COX6CP17-201ENST00000421389 185 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC241520.1-201ENST00000422654 1099 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 NIPA2P1-201ENST00000426223 976 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 CBX1P1-201ENST00000440184 427 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 TPT1P12-201ENST00000448968 492 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 FGF7P3-201ENST00000454645 303 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 BNIP3P41-201ENST00000503774 571 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC006499.6-201ENST00000511169 607 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AF279873.1-201ENST00000523393 313 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 TRAV8-5-201ENST00000537369 341 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AP003717.3-201ENST00000544832 1180 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 YWHAQP7-201ENST00000603536 658 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC005972.3-201ENST00000606304 481 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AL121890.3-201ENST00000618494 516 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 MIR6758-201ENST00000620653 63 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AL445363.3-201ENST00000623080 671 ntBASIC4.3□□□□□ -1.72
HLA-DPA1P20036 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HLA-DPA1P20036 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HLA-DPA1P20036 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms