Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 HSPA8P4-201ENST00000511877 1920 ntBASIC3.54□□□□□ -1.84
VCANP13611 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VCANP13611 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VCANP13611 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VCANP13611 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 Y_RNA.118-201ENST00000363300 101 ntBASIC3.53□□□□□ -1.84
VCANP13611 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.53□□□□□ -1.84
VCANP13611 AL009174.1-201ENST00000426577 416 ntBASIC3.53□□□□□ -1.84
VCANP13611 RPL31P61-201ENST00000496160 376 ntBASIC3.53□□□□□ -1.84
VCANP13611 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.53□□□□□ -1.84
VCANP13611 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VCANP13611 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC3.53□□□□□ -1.84
VCANP13611 MIR133A2-201ENST00000347538 102 ntBASIC3.53□□□□□ -1.84
VCANP13611 AC008264.1-201ENST00000447612 367 ntBASIC3.53□□□□□ -1.84
VCANP13611 AC008413.1-201ENST00000511864 177 ntBASIC3.53□□□□□ -1.84
VCANP13611 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.53□□□□□ -1.84
VCANP13611 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.53□□□□□ -1.84
VCANP13611 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 AC069209.1-201ENST00000619282 651 ntBASIC3.53□□□□□ -1.84
VCANP13611 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
VCANP13611 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VCANP13611 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
VCANP13611 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VCANP13611 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VCANP13611 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
VCANP13611 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 MIR195-201ENST00000385194 87 ntBASIC3.52□□□□□ -1.85
VCANP13611 RN7SKP53-201ENST00000411337 315 ntBASIC3.52□□□□□ -1.85
VCANP13611 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.52□□□□□ -1.85
VCANP13611 AC245517.4-201ENST00000448601 281 ntBASIC3.52□□□□□ -1.85
VCANP13611 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VCANP13611 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.52□□□□□ -1.85
VCANP13611 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VCANP13611 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.52□□□□□ -1.85
VCANP13611 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
VCANP13611 AC005229.2-201ENST00000456995 399 ntBASIC3.52□□□□□ -1.85
VCANP13611 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 ATP5F1P7-201ENST00000567330 760 ntBASIC3.52□□□□□ -1.85
VCANP13611 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 MIR489-201ENST00000384923 84 ntBASIC3.52□□□□□ -1.85
VCANP13611 MIR764-201ENST00000390811 85 ntBASIC3.52□□□□□ -1.85
VCANP13611 MTHFD2P2-201ENST00000407725 247 ntBASIC3.52□□□□□ -1.85
VCANP13611 AC063979.1-201ENST00000415539 377 ntBASIC3.52□□□□□ -1.85
VCANP13611 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.52□□□□□ -1.85
VCANP13611 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.52□□□□□ -1.85
VCANP13611 AC021678.1-201ENST00000505195 936 ntBASIC3.52□□□□□ -1.85
VCANP13611 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VCANP13611 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.52□□□□□ -1.85
VCANP13611 AC015922.4-201ENST00000612568 690 ntBASIC3.52□□□□□ -1.85
VCANP13611 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
VCANP13611 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 RNA5SP187-201ENST00000384400 119 ntBASIC3.51□□□□□ -1.85
VCANP13611 AL591806.2-201ENST00000433122 173 ntBASIC3.51□□□□□ -1.85
VCANP13611 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 AC128716.1-201ENST00000475129 166 ntBASIC3.51□□□□□ -1.85
VCANP13611 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.51□□□□□ -1.85
VCANP13611 SETP12-201ENST00000514068 805 ntBASIC3.51□□□□□ -1.85
VCANP13611 AC004024.1-201ENST00000549244 247 ntBASIC3.51□□□□□ -1.85
VCANP13611 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.51□□□□□ -1.85
VCANP13611 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.51□□□□□ -1.85
VCANP13611 AC243829.7-201ENST00000633081 225 ntBASIC3.51□□□□□ -1.85
VCANP13611 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 DDX18P4-201ENST00000511690 1966 ntBASIC3.51□□□□□ -1.85
VCANP13611 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 AL645568.2-201ENST00000432815 1337 ntBASIC3.51□□□□□ -1.85
VCANP13611 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VCANP13611 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
VCANP13611 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.51□□□□□ -1.85
VCANP13611 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 AL139174.1-201ENST00000531489 886 ntBASIC3.51□□□□□ -1.85
VCANP13611 H3F3AP1-201ENST00000559984 334 ntBASIC3.51□□□□□ -1.85
VCANP13611 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
VCANP13611 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 CEP170P1-201ENST00000502249 4587 ntBASIC3.51□□□□□ -1.85
VCANP13611 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
VCANP13611 AC090971.4-201ENST00000560291 1800 ntBASIC3.51□□□□□ -1.85
VCANP13611 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VCANP13611 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.51□□□□□ -1.85
VCANP13611 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.51□□□□□ -1.85
VCANP13611 SDCBPP2-201ENST00000424643 885 ntBASIC3.51□□□□□ -1.85
VCANP13611 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.51□□□□□ -1.85
VCANP13611 RPL36AP21-201ENST00000490372 323 ntBASIC3.51□□□□□ -1.85
VCANP13611 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.51□□□□□ -1.85
VCANP13611 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms