Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC073850.1-201ENST00000449243 255 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 MEMO1P4-201ENST00000453590 386 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 PMCHL2-203ENST00000457791 237 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 SNORD42A-201ENST00000459584 64 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 RPL7P24-201ENST00000493052 752 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC019235.1-201ENST00000503847 207 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC021678.1-201ENST00000505195 936 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC018710.1-201ENST00000506509 158 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC018442.3-201ENST00000523025 183 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC022690.1-201ENST00000526681 550 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AL133457.1-201ENST00000564251 987 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 RPS3AP23-202ENST00000574601 686 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC006116.3-201ENST00000592968 361 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AL360085.1-201ENST00000604713 532 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 ABBA01000935.2-201ENST00000637477 838 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AP000866.6-201ENST00000638898 3579 ntBASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC7.42□□□□□ -1.22
CSB-PGBD3P0DP91 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC006511.3-201ENST00000624929 1783 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 WBP11P1-201ENST00000562560 1931 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 MTCYBP36-201ENST00000404146 440 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 MTND4LP17-201ENST00000414607 293 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 FABP7P2-201ENST00000429946 379 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 RPL7P31-201ENST00000450192 724 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 SLC31A1P1-201ENST00000451221 567 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AL389915.2-201ENST00000454576 441 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 RPL37P3-201ENST00000456825 293 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC108161.1-201ENST00000461060 402 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC114967.1-201ENST00000504890 259 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC025674.1-201ENST00000507074 324 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 HMGB1P40-201ENST00000525121 540 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AP001004.1-201ENST00000582468 324 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC104785.1-201ENST00000603220 588 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AC233280.2-201ENST00000603917 1070 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 TAS2R6P-201ENST00000605022 826 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-88P-201ENST00000606801 100 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AL050343.2-201ENST00000607338 280 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AL359535.1-201ENST00000612100 1087 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 AP002799.1-201ENST00000623552 423 ntBASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CSB-PGBD3P0DP91 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 OR4K15-201ENST00000305051 1216 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 Y_RNA.89-201ENST00000363031 102 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-433P-201ENST00000363216 104 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 Y_RNA.394-201ENST00000383942 103 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 MTCO3P40-201ENST00000392516 676 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL133388.1-201ENST00000404509 287 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 AL356776.1-201ENST00000406574 447 ntBASIC7.4□□□□□ -1.22
CSB-PGBD3P0DP91 DUTP5-201ENST00000406790 469 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms