Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 Z95327.1-201ENST00000446082 482 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 RPL5P13-201ENST00000462840 709 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 RN7SL542P-201ENST00000467147 294 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 PPIAP15-201ENST00000479662 484 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 AC010627.1-201ENST00000503819 1294 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC4P09017 UBTFL9-201ENST00000534504 1148 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 AC006518.1-201ENST00000541449 943 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC4P09017 AC068446.3-201ENST00000555285 382 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC4P09017 AC112230.1-201ENST00000604342 547 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 AC245389.1-201ENST00000605141 529 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 HMGB1P51-201ENST00000605166 638 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXC4P09017 AL356863.1-201ENST00000623378 1080 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 FAM91A3P-201ENST00000456826 2544 ntBASIC3.85□□□□□ -1.79
HOXC4P09017 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HOXC4P09017 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXC4P09017 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HOXC4P09017 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC4P09017 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC4P09017 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC4P09017 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC4P09017 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HOXC4P09017 SNORA48.7-201ENST00000391302 135 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 RN7SKP156-201ENST00000410308 342 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 SNORA57.3-201ENST00000411095 141 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 TRGV6-201ENST00000417928 299 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC4P09017 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.84□□□□□ -1.79
HOXC4P09017 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 AL606490.8-201ENST00000441624 319 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 NOTCH2P1-201ENST00000443481 624 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 NANOGP10-201ENST00000453325 895 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 RNU6-1218P-201ENST00000458990 108 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 RPL7P15-201ENST00000461190 712 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AP002812.1-201ENST00000495378 474 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXC4P09017 AC025554.1-201ENST00000505641 188 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 PAICSP4-201ENST00000517543 1253 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC008802.1-201ENST00000519121 791 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 OR4A12P-201ENST00000530847 918 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 AC091515.1-201ENST00000548110 679 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC007424.1-203ENST00000554613 687 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 NPM1P47-201ENST00000560843 856 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXC4P09017 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC4P09017 MIR1254-2-201ENST00000579553 63 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC245128.3-201ENST00000594721 748 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXC4P09017 AC005344.1-201ENST00000613391 459 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXC4P09017 AC095038.2-201ENST00000621464 1070 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC104820.1-201ENST00000624183 307 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 AC019080.5-201ENST00000624891 757 ntBASIC3.84□□□□□ -1.79
HOXC4P09017 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXC4P09017 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.8
HOXC4P09017 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.84□□□□□ -1.8
HOXC4P09017 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXC4P09017 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXC4P09017 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
HOXC4P09017 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
HOXC4P09017 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC4P09017 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 RNU6-146P-201ENST00000384602 108 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 ZNF603P-201ENST00000405613 487 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC4P09017 AC048351.1-201ENST00000420064 602 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.83□□□□□ -1.8
HOXC4P09017 Z85994.2-201ENST00000434327 452 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 KCTD9P3-201ENST00000434597 1169 ntBASIC3.83□□□□□ -1.8
HOXC4P09017 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HOXC4P09017 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.83□□□□□ -1.8
HOXC4P09017 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.83□□□□□ -1.8
HOXC4P09017 XKRYP6-201ENST00000440468 1116 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms