Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RB1P06400 RNU6-298P-201ENST00000390888 96 ntBASIC4.71□□□□□ -1.66
RB1P06400 RPL7P27-201ENST00000403775 720 ntBASIC4.71□□□□□ -1.66
RB1P06400 RNU6-77P-201ENST00000410554 91 ntBASIC4.71□□□□□ -1.66
RB1P06400 RN7SKP159-201ENST00000410657 292 ntBASIC4.71□□□□□ -1.66
RB1P06400 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.71□□□□□ -1.66
RB1P06400 HMGB1P45-201ENST00000435986 653 ntBASIC4.71□□□□□ -1.66
RB1P06400 UBE2V1P5-201ENST00000440070 405 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC114495.1-201ENST00000441274 436 ntBASIC4.71□□□□□ -1.66
RB1P06400 AL512326.1-201ENST00000443050 721 ntBASIC4.71□□□□□ -1.66
RB1P06400 MRPL35P4-201ENST00000453682 566 ntBASIC4.71□□□□□ -1.66
RB1P06400 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.71□□□□□ -1.66
RB1P06400 RPS27AP17-201ENST00000463344 455 ntBASIC4.71□□□□□ -1.66
RB1P06400 RPL5P30-201ENST00000465511 891 ntBASIC4.71□□□□□ -1.66
RB1P06400 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.71□□□□□ -1.66
RB1P06400 RN7SL542P-201ENST00000467147 294 ntBASIC4.71□□□□□ -1.66
RB1P06400 RPL23AP37-201ENST00000479658 549 ntBASIC4.71□□□□□ -1.66
RB1P06400 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.71□□□□□ -1.66
RB1P06400 AC113430.1-201ENST00000506872 718 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC008494.2-201ENST00000514544 370 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC138938.1-201ENST00000515431 782 ntBASIC4.71□□□□□ -1.66
RB1P06400 RNA5SP303-201ENST00000516192 130 ntBASIC4.71□□□□□ -1.66
RB1P06400 SCARNA1-201ENST00000517138 166 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC090819.1-201ENST00000523800 1111 ntBASIC4.71□□□□□ -1.66
RB1P06400 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.71□□□□□ -1.66
RB1P06400 TVP23BP1-201ENST00000557500 617 ntBASIC4.71□□□□□ -1.66
RB1P06400 HNRNPCP4-201ENST00000571636 900 ntBASIC4.71□□□□□ -1.66
RB1P06400 CYCSP40-201ENST00000575927 294 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.71□□□□□ -1.66
RB1P06400 NF1P5-201ENST00000588287 448 ntBASIC4.71□□□□□ -1.66
RB1P06400 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.71□□□□□ -1.66
RB1P06400 AL606834.3-201ENST00000602615 496 ntBASIC4.71□□□□□ -1.66
RB1P06400 MIR6867-201ENST00000610636 67 ntBASIC4.71□□□□□ -1.66
RB1P06400 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 AC009318.3-201ENST00000616916 503 ntBASIC4.71□□□□□ -1.66
RB1P06400 AC099654.9-201ENST00000637055 678 ntBASIC4.71□□□□□ -1.66
RB1P06400 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RB1P06400 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RB1P06400 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.71□□□□□ -1.66
RB1P06400 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.7□□□□□ -1.66
RB1P06400 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RB1P06400 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.7□□□□□ -1.66
RB1P06400 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RB1P06400 MAPK10-320ENST00000641462 6696 ntBASIC4.7□□□□□ -1.66
RB1P06400 RNU6-353P-201ENST00000364266 108 ntBASIC4.7□□□□□ -1.66
RB1P06400 RNU6-549P-201ENST00000384433 107 ntBASIC4.7□□□□□ -1.66
RB1P06400 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 RNA5SP44-201ENST00000410446 133 ntBASIC4.7□□□□□ -1.66
RB1P06400 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.7□□□□□ -1.66
RB1P06400 TAF13P2-201ENST00000416876 286 ntBASIC4.7□□□□□ -1.66
RB1P06400 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 MTND2P9-201ENST00000422293 931 ntBASIC4.7□□□□□ -1.66
RB1P06400 CKS1BP6-201ENST00000424932 240 ntBASIC4.7□□□□□ -1.66
RB1P06400 OR2AH1P-201ENST00000425717 928 ntBASIC4.7□□□□□ -1.66
RB1P06400 HMGB3P5-201ENST00000428894 612 ntBASIC4.7□□□□□ -1.66
RB1P06400 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 NMNAT1P2-201ENST00000435192 860 ntBASIC4.7□□□□□ -1.66
RB1P06400 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 RPL23AP52-201ENST00000439311 478 ntBASIC4.7□□□□□ -1.66
RB1P06400 RRM2P4-201ENST00000441721 562 ntBASIC4.7□□□□□ -1.66
RB1P06400 AL592437.1-201ENST00000443781 492 ntBASIC4.7□□□□□ -1.66
RB1P06400 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.7□□□□□ -1.66
RB1P06400 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RB1P06400 AC119751.1-201ENST00000513357 765 ntBASIC4.7□□□□□ -1.66
RB1P06400 RNA5SP49-201ENST00000516450 115 ntBASIC4.7□□□□□ -1.66
RB1P06400 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.7□□□□□ -1.66
RB1P06400 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 IGJP1-201ENST00000522682 475 ntBASIC4.7□□□□□ -1.66
RB1P06400 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RB1P06400 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 DYNLL1P4-201ENST00000549314 266 ntBASIC4.7□□□□□ -1.66
RB1P06400 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 ZNF971P-201ENST00000562068 1249 ntBASIC4.7□□□□□ -1.66
RB1P06400 CYP2C60P-201ENST00000566088 139 ntBASIC4.7□□□□□ -1.66
RB1P06400 MTCO1P40-201ENST00000574371 625 ntBASIC4.7□□□□□ -1.66
RB1P06400 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 RN7SL600P-201ENST00000581811 299 ntBASIC4.7□□□□□ -1.66
RB1P06400 AC009948.4-201ENST00000604692 675 ntBASIC4.7□□□□□ -1.66
RB1P06400 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.7□□□□□ -1.66
RB1P06400 AC017076.1-201ENST00000607613 578 ntBASIC4.7□□□□□ -1.66
RB1P06400 AC084824.4-201ENST00000620106 731 ntBASIC4.7□□□□□ -1.66
RB1P06400 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.7□□□□□ -1.66
RB1P06400 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.7□□□□□ -1.66
RB1P06400 BX649567.1-201ENST00000642071 1134 ntBASIC4.7□□□□□ -1.66
RB1P06400 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RB1P06400 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RB1P06400 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RB1P06400 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms