Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
PDGFBP01127 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PDGFBP01127 AC024341.1-201ENST00000526444 1552 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PDGFBP01127 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 AC006971.1-201ENST00000407916 4486 ntBASIC4.31□□□□□ -1.72
PDGFBP01127 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFBP01127 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFBP01127 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
PDGFBP01127 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFBP01127 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFBP01127 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 RPL35AP21-201ENST00000437667 333 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFBP01127 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFBP01127 AC096992.1-201ENST00000459808 709 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.3□□□□□ -1.72
PDGFBP01127 AC006499.5-201ENST00000505037 514 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 HPRT1P2-201ENST00000505250 544 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFBP01127 MTND3P24-201ENST00000506306 329 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 AC015912.2-201ENST00000571053 181 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.3□□□□□ -1.72
PDGFBP01127 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFBP01127 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFBP01127 AP001033.2-201ENST00000609701 1003 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 AC067852.7-201ENST00000623270 535 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.3□□□□□ -1.72
PDGFBP01127 ATE1-AS1-202ENST00000636460 506 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 FP325313.1-201ENST00000638228 703 ntBASIC4.3□□□□□ -1.72
PDGFBP01127 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.3□□□□□ -1.72
PDGFBP01127 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.3□□□□□ -1.72
PDGFBP01127 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PDGFBP01127 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PDGFBP01127 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFBP01127 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFBP01127 NXPH1-205ENST00000602349 1953 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PDGFBP01127 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDGFBP01127 DCAF13P3-201ENST00000561147 1334 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 RNU1-20P-201ENST00000363314 162 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFBP01127 ATP5F1P4-201ENST00000397288 746 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 PTGES3P2-201ENST00000407942 482 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC073508.1-201ENST00000428866 656 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 HMGN2P31-201ENST00000432430 273 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFBP01127 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFBP01127 AP000949.1-201ENST00000438328 629 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFBP01127 CYCSP24-201ENST00000445119 316 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 PRDX3P3-201ENST00000447765 522 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 AL353718.1-201ENST00000451028 517 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 TRBV8-2-201ENST00000475637 270 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC110792.1-201ENST00000491826 472 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 AC010468.3-201ENST00000508225 458 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC119751.5-201ENST00000514077 770 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 RNU6-1102P-201ENST00000516149 96 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 RNA5SP73-201ENST00000516744 108 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFBP01127 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFBP01127 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFBP01127 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC022882.1-201ENST00000532142 501 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 OSBPL9P3-201ENST00000534523 595 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
PDGFBP01127 AL136520.1-202ENST00000555494 763 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.29□□□□□ -1.72
PDGFBP01127 AC079148.1-201ENST00000565944 819 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 TMF1P1-201ENST00000576058 373 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC005412.1-201ENST00000580812 1049 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 MIR3124-201ENST00000582636 67 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 AC023762.1-201ENST00000603280 584 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 AC015967.1-201ENST00000619893 476 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PDGFBP01127 MTND5P11-201ENST00000511037 1812 ntBASIC4.29□□□□□ -1.72
PDGFBP01127 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
PDGFBP01127 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.29□□□□□ -1.72
PDGFBP01127 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms