Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC10.77□□□□□ -0.69
MSH5O43196 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC10.76□□□□□ -0.69
MSH5O43196 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC10.76□□□□□ -0.69
MSH5O43196 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 RNU6-222P-201ENST00000362438 107 ntBASIC10.76□□□□□ -0.69
MSH5O43196 RNU6-1107P-201ENST00000364817 104 ntBASIC10.76□□□□□ -0.69
MSH5O43196 MIR431-201ENST00000385266 114 ntBASIC10.76□□□□□ -0.69
MSH5O43196 RPS4XP3-201ENST00000398541 413 ntBASIC10.76□□□□□ -0.69
MSH5O43196 RNU4-43P-201ENST00000410628 137 ntBASIC10.76□□□□□ -0.69
MSH5O43196 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC10.76□□□□□ -0.69
MSH5O43196 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC10.76□□□□□ -0.69
MSH5O43196 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 Z82188.1-201ENST00000436709 154 ntBASIC10.76□□□□□ -0.69
MSH5O43196 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC10.76□□□□□ -0.69
MSH5O43196 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
MSH5O43196 RPL23AP15-201ENST00000450202 459 ntBASIC10.76□□□□□ -0.69
MSH5O43196 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC10.76□□□□□ -0.69
MSH5O43196 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC10.76□□□□□ -0.69
MSH5O43196 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC10.76□□□□□ -0.69
MSH5O43196 AL355076.3-201ENST00000555838 587 ntBASIC10.76□□□□□ -0.69
MSH5O43196 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC10.76□□□□□ -0.69
MSH5O43196 MIR3714-201ENST00000579507 65 ntBASIC10.76□□□□□ -0.69
MSH5O43196 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC10.76□□□□□ -0.69
MSH5O43196 AC004852.3-201ENST00000614131 326 ntBASIC10.76□□□□□ -0.69
MSH5O43196 AL031601.2-202ENST00000622650 282 ntBASIC10.76□□□□□ -0.69
MSH5O43196 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC10.76□□□□□ -0.69
MSH5O43196 AC091152.4-201ENST00000623480 3483 ntBASIC10.76□□□□□ -0.69
MSH5O43196 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC10.76□□□□□ -0.69
MSH5O43196 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 HSP90AA5P-201ENST00000438353 2192 ntBASIC10.76□□□□□ -0.69
MSH5O43196 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC10.76□□□□□ -0.69
MSH5O43196 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
MSH5O43196 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
MSH5O43196 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
MSH5O43196 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC10.75□□□□□ -0.69
MSH5O43196 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
MSH5O43196 SNORA17.1-201ENST00000362945 126 ntBASIC10.75□□□□□ -0.69
MSH5O43196 RNU4-80P-201ENST00000363200 141 ntBASIC10.75□□□□□ -0.69
MSH5O43196 Y_RNA.280-201ENST00000364765 112 ntBASIC10.75□□□□□ -0.69
MSH5O43196 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 RNA5SP209-201ENST00000411237 97 ntBASIC10.75□□□□□ -0.69
MSH5O43196 FHP1-201ENST00000442741 703 ntBASIC10.75□□□□□ -0.69
MSH5O43196 AC093166.3-201ENST00000448785 303 ntBASIC10.75□□□□□ -0.69
MSH5O43196 CTSLP6-201ENST00000458273 1002 ntBASIC10.75□□□□□ -0.69
MSH5O43196 RN7SL213P-201ENST00000463482 317 ntBASIC10.75□□□□□ -0.69
MSH5O43196 RPS27AP1-201ENST00000475545 471 ntBASIC10.75□□□□□ -0.69
MSH5O43196 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC10.75□□□□□ -0.69
MSH5O43196 AC114801.1-201ENST00000512633 297 ntBASIC10.75□□□□□ -0.69
MSH5O43196 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC10.75□□□□□ -0.69
MSH5O43196 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC10.75□□□□□ -0.69
MSH5O43196 FAM71BP1-201ENST00000604431 523 ntBASIC10.75□□□□□ -0.69
MSH5O43196 AC109309.2-201ENST00000612597 332 ntBASIC10.75□□□□□ -0.69
MSH5O43196 NUDT13-208ENST00000617744 928 ntTSL 5 BASIC10.75□□□□□ -0.69
MSH5O43196 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
MSH5O43196 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC10.75□□□□□ -0.69
MSH5O43196 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC10.75□□□□□ -0.69
MSH5O43196 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC10.75□□□□□ -0.69
MSH5O43196 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
MSH5O43196 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
MSH5O43196 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MSH5O43196 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MSH5O43196 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC10.74□□□□□ -0.69
MSH5O43196 C3P1-202ENST00000497718 4954 ntBASIC10.74□□□□□ -0.69
MSH5O43196 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC10.74□□□□□ -0.69
MSH5O43196 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MSH5O43196 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MSH5O43196 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
MSH5O43196 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
MSH5O43196 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
MSH5O43196 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
MSH5O43196 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
MSH5O43196 RNU6-20P-201ENST00000384106 107 ntBASIC10.74□□□□□ -0.69
MSH5O43196 AL023807.1-201ENST00000407932 359 ntBASIC10.74□□□□□ -0.69
MSH5O43196 GRPEL2P2-201ENST00000421856 670 ntBASIC10.74□□□□□ -0.69
MSH5O43196 HSPE1P13-201ENST00000451143 297 ntBASIC10.74□□□□□ -0.69
MSH5O43196 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC10.74□□□□□ -0.69
MSH5O43196 AC021205.1-201ENST00000468797 348 ntBASIC10.74□□□□□ -0.69
MSH5O43196 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC10.74□□□□□ -0.69
MSH5O43196 RN7SKP67-201ENST00000515905 235 ntBASIC10.74□□□□□ -0.69
MSH5O43196 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC10.74□□□□□ -0.69
MSH5O43196 RN7SL786P-201ENST00000579130 298 ntBASIC10.74□□□□□ -0.69
MSH5O43196 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC10.74□□□□□ -0.69
MSH5O43196 AC000123.2-201ENST00000623124 461 ntBASIC10.74□□□□□ -0.69
MSH5O43196 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC10.74□□□□□ -0.69
MSH5O43196 SCNN1G-201ENST00000300061 3507 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms