Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.19□□□□□ -1.42
SOX1O00570 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SOX1O00570 RNU2-8P-201ENST00000410727 190 ntBASIC6.19□□□□□ -1.42
SOX1O00570 RNU6-373P-201ENST00000411247 98 ntBASIC6.19□□□□□ -1.42
SOX1O00570 OR9R1P-201ENST00000412200 877 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC023347.2-201ENST00000433994 462 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX1O00570 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AC073594.1-201ENST00000462065 364 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC021660.1-201ENST00000465006 554 ntBASIC6.19□□□□□ -1.42
SOX1O00570 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 AC013356.1-201ENST00000489027 564 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC025674.1-201ENST00000507074 324 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.19□□□□□ -1.42
SOX1O00570 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AC105029.1-201ENST00000520250 669 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.19□□□□□ -1.42
SOX1O00570 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 PARP1P2-201ENST00000556806 195 ntBASIC6.19□□□□□ -1.42
SOX1O00570 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SOX1O00570 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 AC136624.4-201ENST00000573044 370 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AL355375.2-201ENST00000574825 175 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 MIR4260-201ENST00000583107 67 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.19□□□□□ -1.42
SOX1O00570 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 AC243960.4-201ENST00000600532 288 ntBASIC6.19□□□□□ -1.42
SOX1O00570 RNU6-87P-201ENST00000607561 108 ntBASIC6.19□□□□□ -1.42
SOX1O00570 RNU6-84P-201ENST00000607737 102 ntBASIC6.19□□□□□ -1.42
SOX1O00570 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.19□□□□□ -1.42
SOX1O00570 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.19□□□□□ -1.42
SOX1O00570 AL732618.1-201ENST00000623251 301 ntBASIC6.19□□□□□ -1.42
SOX1O00570 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX1O00570 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 AL136531.3-201ENST00000624378 3658 ntBASIC6.19□□□□□ -1.42
SOX1O00570 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 AC003973.3-201ENST00000624863 2822 ntBASIC6.19□□□□□ -1.42
SOX1O00570 OR11H5P-202ENST00000641612 1325 ntBASIC6.19□□□□□ -1.42
SOX1O00570 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX1O00570 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 AL591848.4-201ENST00000567832 3472 ntBASIC6.19□□□□□ -1.42
SOX1O00570 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
SOX1O00570 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.19□□□□□ -1.42
SOX1O00570 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SOX1O00570 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.19□□□□□ -1.42
SOX1O00570 ATP8A2P2-201ENST00000437678 1568 ntBASIC6.18□□□□□ -1.42
SOX1O00570 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SOX1O00570 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.18□□□□□ -1.42
SOX1O00570 NMD3P1-201ENST00000439704 1488 ntBASIC6.18□□□□□ -1.42
SOX1O00570 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SOX1O00570 MIR433-201ENST00000384837 93 ntBASIC6.18□□□□□ -1.42
SOX1O00570 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX1O00570 AL121972.1-201ENST00000402023 252 ntBASIC6.18□□□□□ -1.42
SOX1O00570 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.18□□□□□ -1.42
SOX1O00570 RN7SKP222-201ENST00000410651 315 ntBASIC6.18□□□□□ -1.42
SOX1O00570 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX1O00570 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX1O00570 AL672138.1-201ENST00000450604 1015 ntBASIC6.18□□□□□ -1.42
SOX1O00570 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.18□□□□□ -1.42
SOX1O00570 AL121877.1-201ENST00000453704 622 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC233279.1-201ENST00000455300 423 ntBASIC6.18□□□□□ -1.42
SOX1O00570 RPL17P2-201ENST00000491913 451 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC026979.1-201ENST00000492525 396 ntBASIC6.18□□□□□ -1.42
SOX1O00570 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX1O00570 AP003080.1-202ENST00000526526 915 ntBASIC6.18□□□□□ -1.42
SOX1O00570 PHBP17-201ENST00000528576 541 ntBASIC6.18□□□□□ -1.42
SOX1O00570 RPA2P3-201ENST00000533268 770 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.18□□□□□ -1.42
SOX1O00570 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX1O00570 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SOX1O00570 AL163952.1-202ENST00000569625 600 ntBASIC6.18□□□□□ -1.42
SOX1O00570 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.18□□□□□ -1.42
SOX1O00570 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.18□□□□□ -1.42
SOX1O00570 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms