Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 USP9YP7-201ENST00000436723 430 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CACNB4O00305 USP9YP32-201ENST00000452432 430 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 AC096992.1-201ENST00000459808 709 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 RPL35AP15-201ENST00000468042 339 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 OR5H3P-201ENST00000502817 919 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 AC112518.2-201ENST00000508565 425 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 AP003730.1-201ENST00000524605 285 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.29□□□□□ -1.72
CACNB4O00305 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CACNB4O00305 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.29□□□□□ -1.72
CACNB4O00305 AC098483.2-201ENST00000603158 454 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 AL392112.1-201ENST00000605115 829 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 VN1R9P-201ENST00000614184 867 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 AC006213.5-201ENST00000619673 288 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 FP325313.1-201ENST00000638228 703 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 AC132825.7-201ENST00000638744 335 ntBASIC4.29□□□□□ -1.72
CACNB4O00305 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
CACNB4O00305 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CACNB4O00305 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CACNB4O00305 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.29□□□□□ -1.72
CACNB4O00305 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CACNB4O00305 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CACNB4O00305 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CACNB4O00305 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CACNB4O00305 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.28□□□□□ -1.72
CACNB4O00305 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CACNB4O00305 AC017104.4-201ENST00000636283 1592 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 RNA5SP391-201ENST00000363456 119 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 RNA5SP167-201ENST00000365461 116 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 RNA5SP151-201ENST00000365632 117 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 MIR153-1-201ENST00000384914 90 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 UBE2D3P3-201ENST00000426992 425 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 AC092809.1-201ENST00000441469 474 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 HMGB3P30-201ENST00000457863 606 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 SETP6-201ENST00000479329 568 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC090013.1-201ENST00000485147 480 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC041039.1-201ENST00000485656 536 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 AL592156.1-201ENST00000508758 304 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC008958.1-201ENST00000511047 682 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 RNA5SP309-201ENST00000516670 106 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC008694.2-201ENST00000517591 306 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 CYCSP29-201ENST00000533731 318 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 TRAV8-5-201ENST00000537369 341 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.28□□□□□ -1.72
CACNB4O00305 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 ATP5F1P7-201ENST00000567330 760 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 MTND6P33-201ENST00000571794 183 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AP000919.1-202ENST00000581139 1264 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.28□□□□□ -1.72
CACNB4O00305 AC020910.2-201ENST00000603635 610 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 RNA5SP108-201ENST00000605921 117 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AC023509.5-201ENST00000617434 807 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.28□□□□□ -1.72
CACNB4O00305 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CACNB4O00305 KPNA2P2-201ENST00000419546 1489 ntBASIC4.28□□□□□ -1.72
CACNB4O00305 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CACNB4O00305 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CACNB4O00305 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.27□□□□□ -1.73
CACNB4O00305 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CACNB4O00305 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CACNB4O00305 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CACNB4O00305 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CACNB4O00305 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CACNB4O00305 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CACNB4O00305 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
CACNB4O00305 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.27□□□□□ -1.73
CACNB4O00305 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CACNB4O00305 AC097374.1-203ENST00000400783 485 ntBASIC4.27□□□□□ -1.73
CACNB4O00305 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.27□□□□□ -1.73
CACNB4O00305 AC004975.1-201ENST00000428733 208 ntBASIC4.27□□□□□ -1.73
CACNB4O00305 SKP1P3-201ENST00000429280 487 ntBASIC4.27□□□□□ -1.73
CACNB4O00305 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.27□□□□□ -1.73
CACNB4O00305 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms