Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 AC092447.10-201ENST00000620607 1652 ntBASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 AP000866.6-201ENST00000638898 3579 ntBASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 AC034229.2-201ENST00000566945 2508 ntBASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.73□□□□□ -1.33
TMEM88BA6NKF7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 CBX3P1-201ENST00000325243 554 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 Y_RNA.46-201ENST00000362695 102 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 RNU6-534P-201ENST00000364877 106 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 RNU6-730P-201ENST00000383954 104 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 MT-TL1-201ENST00000386347 75 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 DUTP5-201ENST00000406790 469 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ZNF90P2-204ENST00000419323 1075 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AL353777.1-201ENST00000425552 326 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 RPL31P35-201ENST00000431058 377 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 MTCYBP45-201ENST00000435243 565 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 CALM1P1-201ENST00000442082 433 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 RPL23AP20-201ENST00000447965 421 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC114947.2-201ENST00000565748 2125 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC234771.5-201ENST00000600161 514 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 RNF138P2-201ENST00000603490 592 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC008745.1-201ENST00000604064 271 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AL020991.1-201ENST00000612314 373 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC009268.2-201ENST00000621925 457 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC091905.1-201ENST00000624400 311 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC024560.2-201ENST00000507981 1497 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AC011978.2-201ENST00000569835 2054 ntBASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.72□□□□□ -1.33
TMEM88BA6NKF7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TMEM88BA6NKF7 AC022819.1-201ENST00000563495 3910 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RNVU1-6-201ENST00000364688 164 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RNU6-761P-201ENST00000384148 107 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 SNORA51.8-201ENST00000384234 132 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RNA5SP339-201ENST00000390987 122 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AC073136.2-201ENST00000417282 849 ntBASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.71□□□□□ -1.34
TMEM88BA6NKF7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms