Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RN7SKP141-201ENST00000516167 338 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 SNORA70.14-201ENST00000516205 110 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC008802.1-201ENST00000519121 791 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 MTND1P6-201ENST00000523621 946 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC091515.1-201ENST00000548110 679 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 TVP23BP1-201ENST00000557500 617 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AL360157.1-201ENST00000565962 87 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 MIR4644-201ENST00000579929 84 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 FAM27D1-201ENST00000612308 341 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC009032.1-201ENST00000617574 431 ntBASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RHBDD3Q9Y3P4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 XPOTP1-201ENST00000443317 2398 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 EIF5P1-201ENST00000400019 1231 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 Z86062.1-201ENST00000406773 777 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 RPL23AP26-201ENST00000412728 464 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AL355994.1-201ENST00000424379 260 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 FO393419.3-201ENST00000428741 282 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 DNAJC19P7-201ENST00000428811 344 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AL035458.1-201ENST00000433096 585 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC092685.1-201ENST00000447960 1243 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 KCTD9P2-201ENST00000512203 1013 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 CDH12P4-201ENST00000517835 295 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 CDH12P3-201ENST00000517935 295 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 CDH12P1-201ENST00000518435 295 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 HMGB1P46-201ENST00000520062 610 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 MIR5096-201ENST00000583713 70 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC020910.2-201ENST00000603635 610 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 AC008745.1-201ENST00000604064 271 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 MIR4278-201ENST00000636094 69 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 MTCO1P8-201ENST00000416914 1523 ntBASIC3.6□□□□□ -1.83
RHBDD3Q9Y3P4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 FAM3C2-201ENST00000312214 681 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 RNA5SP509-201ENST00000364577 119 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 RNU6-98P-201ENST00000384173 107 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 HMGB1P13-201ENST00000406019 642 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 RPL23AP33-201ENST00000442301 452 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 CYCSP42-201ENST00000450823 238 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 RPS20P4-201ENST00000461659 355 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 RN7SL303P-201ENST00000469773 251 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC109327.1-201ENST00000471666 403 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC104689.1-201ENST00000473356 768 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AF213884.1-201ENST00000488102 463 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 IGKV2-38-201ENST00000517443 247 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 CR383656.6-201ENST00000550518 394 ntBASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.59□□□□□ -1.83
RHBDD3Q9Y3P4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms