Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ICE2P1-201ENST00000512800 1849 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 AC011447.7-201ENST00000624228 1590 ntBASIC5.76□□□□□ -1.49
BCAS3Q9H6U6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC008033.1-201ENST00000216407 1162 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 SNORA72.1-201ENST00000363485 129 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 Y_RNA.256-201ENST00000364594 104 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 RNU6-185P-201ENST00000384421 107 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 MIR16-1-201ENST00000385271 89 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AL139098.1-201ENST00000407291 389 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 MIR1277-201ENST00000408536 78 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AL590806.1-201ENST00000415818 853 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 MTATP6P30-201ENST00000443540 664 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 RPL21P133-201ENST00000443666 476 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 RPL23AP35-201ENST00000451906 501 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 RPL9P6-201ENST00000492764 598 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC091133.4-201ENST00000511142 308 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC022483.1-201ENST00000514020 567 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 RNA5SP228-201ENST00000516232 133 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 RNU6-416P-201ENST00000516265 103 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC021006.3-201ENST00000530771 192 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC124947.2-202ENST00000552735 133 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 PCMTD1P2-201ENST00000565017 355 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC019322.1-201ENST00000571869 389 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 C8orf59P2-201ENST00000603441 271 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC112230.1-201ENST00000604342 547 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC006566.1-201ENST00000608943 513 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC011472.4-201ENST00000615848 491 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 AC007996.1-201ENST00000620414 2821 ntBASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
BCAS3Q9H6U6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 RN7SKP226-201ENST00000364912 300 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 MIR217-201ENST00000384817 110 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC138393.2-201ENST00000414742 246 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC012498.1-201ENST00000424037 437 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 RPS27AP6-201ENST00000427962 448 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 CDY14P-201ENST00000431260 1014 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 FTH1P16-201ENST00000435241 552 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 UBE2FP3-201ENST00000436366 524 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AL590399.4-201ENST00000436561 601 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 RPS26P30-201ENST00000443431 335 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 REG1CP-206ENST00000447469 496 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 CDY23P-201ENST00000451661 1014 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 KLF3P2-201ENST00000465138 268 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC090013.1-201ENST00000485147 480 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC010350.1-201ENST00000504908 231 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC008802.1-201ENST00000519121 791 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 OR5AK1P-201ENST00000524837 922 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 OR5BC1P-201ENST00000529327 739 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC104383.1-201ENST00000530297 370 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AP002812.4-201ENST00000532139 286 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 CR383656.6-201ENST00000550518 394 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 GTF2IP22-201ENST00000554443 182 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC006504.3-201ENST00000586818 523 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms