Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 RN7SL600P-201ENST00000581811 299 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC112230.1-201ENST00000604342 547 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 RNU4-89P-201ENST00000607443 133 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC012531.5-201ENST00000611375 151 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC008121.2-201ENST00000614647 523 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC092628.2-201ENST00000622492 339 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 AL445363.3-201ENST00000623080 671 ntBASIC4.04□□□□□ -1.76
TRIM4Q9C037 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM4Q9C037 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM4Q9C037 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 Y_RNA.111-201ENST00000363248 100 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 Z92545.1-201ENST00000411782 234 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 ARF4P2-201ENST00000430209 526 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC011742.1-201ENST00000431448 434 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 TPT1P3-201ENST00000492841 512 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 RN7SL812P-201ENST00000493791 279 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 BNIP3P41-201ENST00000503774 571 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 OR7E10P-201ENST00000526420 991 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC105233.3-201ENST00000531125 744 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC027176.2-201ENST00000559166 746 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC018552.3-201ENST00000567416 561 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 OR2BH1P-201ENST00000608850 864 ntBASIC4.03□□□□□ -1.76
TRIM4Q9C037 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.03□□□□□ -1.76
TRIM4Q9C037 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM4Q9C037 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM4Q9C037 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC114546.3-201ENST00000623582 1734 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 RPL5P19-201ENST00000404228 893 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM4Q9C037 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 AL157831.1-201ENST00000426134 473 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 RPL23AP14-201ENST00000468281 468 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 RN7SL330P-201ENST00000469709 307 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 RPS27AP13-201ENST00000498403 237 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC008958.1-201ENST00000511047 682 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM4Q9C037 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 HSPE1P5-201ENST00000561489 272 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC105036.1-201ENST00000566222 271 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 MIR5685-201ENST00000579080 79 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM4Q9C037 uc_338.13-201ENST00000618243 179 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 AC006042.3-201ENST00000454684 1469 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 LINC00561-201ENST00000565815 2738 ntBASIC4.02□□□□□ -1.77
TRIM4Q9C037 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM4Q9C037 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.02□□□□□ -1.77
TRIM4Q9C037 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRIM4Q9C037 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 VPS35P1-201ENST00000563400 1518 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM4Q9C037 RNA5SP175-201ENST00000364275 119 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 SNORA73.2-201ENST00000364946 201 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 NDUFB4P4-201ENST00000404822 243 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AP000357.1-201ENST00000409926 1165 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 OR8F1P-201ENST00000425243 930 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM4Q9C037 MTCO3P16-201ENST00000454456 754 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 AC010307.1-201ENST00000467206 836 ntBASIC4.01□□□□□ -1.77
TRIM4Q9C037 RPL7P9-201ENST00000468715 747 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms