Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.69□□□□□ -1.5
PTPN18Q99952 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
PTPN18Q99952 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN18Q99952 AC011944.2-201ENST00000624440 683 ntBASIC5.69□□□□□ -1.5
PTPN18Q99952 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN18Q99952 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.69□□□□□ -1.5
PTPN18Q99952 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN18Q99952 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN18Q99952 AC092447.7-201ENST00000422212 1621 ntBASIC5.69□□□□□ -1.5
PTPN18Q99952 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN18Q99952 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.69□□□□□ -1.5
PTPN18Q99952 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN18Q99952 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN18Q99952 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN18Q99952 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 OR4G2P-201ENST00000328113 903 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 RNU6-1339P-201ENST00000363574 91 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTPN18Q99952 MED28P3-201ENST00000444288 531 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN18Q99952 RHEBP2-201ENST00000450289 600 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN18Q99952 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC104971.1-201ENST00000495117 578 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC073358.1-201ENST00000505671 684 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC109471.1-201ENST00000511631 612 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 FABP5P5-201ENST00000515537 406 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC018442.3-201ENST00000523025 183 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN18Q99952 OR4R3P-201ENST00000525084 838 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC124293.1-201ENST00000530034 493 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC007954.1-201ENST00000554198 494 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC079171.1-201ENST00000568788 914 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC023575.1-201ENST00000580510 358 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AL392112.1-201ENST00000605115 829 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC006270.3-201ENST00000605967 1036 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC090186.1-201ENST00000605991 572 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC008498.1-201ENST00000613012 531 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC008083.4-201ENST00000615076 444 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC127502.3-201ENST00000636170 1206 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN18Q99952 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 TTC39DP-201ENST00000416781 1688 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN18Q99952 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AL592148.3-201ENST00000608771 2646 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 AC011477.1-204ENST00000623416 1325 ntBASIC5.68□□□□□ -1.5
PTPN18Q99952 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN18Q99952 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN18Q99952 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
PTPN18Q99952 AC004158.1-201ENST00000564508 4319 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN18Q99952 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN18Q99952 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN18Q99952 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN18Q99952 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTPN18Q99952 RNU6-500P-201ENST00000362349 107 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 Y_RNA.359-201ENST00000365498 102 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 AL451142.1-201ENST00000375867 775 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 RNU6-225P-201ENST00000384613 103 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 MIR23A-201ENST00000385245 73 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 MTCO3P31-201ENST00000405526 789 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN18Q99952 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN18Q99952 AC114755.2-201ENST00000413520 361 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 TBCAP2-201ENST00000416175 326 ntBASIC5.67□□□□□ -1.5
PTPN18Q99952 AL139421.1-201ENST00000423010 169 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms