Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP88Q99567 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP88Q99567 AL132657.2-201ENST00000564417 358 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.55□□□□□ -1.52
NUP88Q99567 MIR3936-201ENST00000584304 110 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 RN7SL435P-201ENST00000584418 282 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AC124856.1-201ENST00000600819 896 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AC131235.4-201ENST00000609288 620 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NUP88Q99567 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.55□□□□□ -1.52
NUP88Q99567 AC093849.1-201ENST00000563631 2209 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NUP88Q99567 AC090017.1-201ENST00000548612 1779 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 SOCS5P3-201ENST00000425115 1576 ntBASIC5.55□□□□□ -1.52
NUP88Q99567 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NUP88Q99567 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP88Q99567 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 DDX18P5-201ENST00000534547 1306 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC109315.1-201ENST00000584143 1347 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP88Q99567 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP88Q99567 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
NUP88Q99567 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP88Q99567 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NUP88Q99567 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NUP88Q99567 RNU6-582P-201ENST00000362989 107 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 RNU6-1151P-201ENST00000384684 107 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 RNU6-603P-201ENST00000411403 107 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC099336.2-201ENST00000422457 254 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP88Q99567 Z93242.1-201ENST00000427102 353 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP88Q99567 RFC5P1-201ENST00000454419 874 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC099560.2-201ENST00000457554 255 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 MTND1P16-201ENST00000465177 898 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 GAPDHP36-201ENST00000480688 918 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 SETP14-201ENST00000497538 873 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP88Q99567 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.54□□□□□ -1.52
NUP88Q99567 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 AC005868.1-201ENST00000536421 331 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC005832.3-201ENST00000537929 631 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.54□□□□□ -1.52
NUP88Q99567 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP88Q99567 DUXAP1-201ENST00000556632 463 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC105129.1-201ENST00000560250 297 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP88Q99567 AC006539.2-201ENST00000601729 572 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC006363.1-201ENST00000603806 463 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC009220.3-201ENST00000604318 586 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC010200.2-201ENST00000605098 235 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 AC116447.1-201ENST00000613153 453 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NUP88Q99567 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.54□□□□□ -1.52
NUP88Q99567 AC116618.1-201ENST00000634617 774 ntBASIC5.54□□□□□ -1.52
NUP88Q99567 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NUP88Q99567 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP88Q99567 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP88Q99567 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 AC005539.1-201ENST00000443768 1479 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.53□□□□□ -1.52
NUP88Q99567 AC009229.4-201ENST00000623854 1947 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NUP88Q99567 SNORD113-6-201ENST00000363345 75 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 RNU6-157P-201ENST00000383957 107 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 MIR217-201ENST00000384817 110 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RPL23AP47-201ENST00000408017 460 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RNA5SP80-201ENST00000410475 111 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.53□□□□□ -1.52
NUP88Q99567 PTP4A1P5-201ENST00000420305 455 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RPEP3-201ENST00000425462 676 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 C4BPAP2-201ENST00000428434 478 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 AC092162.1-201ENST00000432828 434 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 MTCYBP34-201ENST00000439552 670 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NUP88Q99567 ARL2BPP10-201ENST00000446487 531 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 AC079168.2-201ENST00000453977 416 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 RN7SL517P-201ENST00000462240 305 ntBASIC5.53□□□□□ -1.52
NUP88Q99567 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.53□□□□□ -1.52
NUP88Q99567 AK3P4-201ENST00000504283 583 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms